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scnpilot_solids2_trim150_scaffold_1224_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1224_curated_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(176..586)
DNA (411bp) protein (137aa)
Thioesterase superfamily protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZD7_CONWI
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADB51902.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_2
Wickerhamomyces ciferrii, Wickerhamomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

643..1188
DNA (546bp) protein (182aa)
Putative secreted protein n=1 Tax=Wickerhamomyces ciferrii (strain F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL Y-1031) RepID=K0KD41_WICCF
Putative secreted protein {ECO:0000313|EMBL:CCH40796.1}; TaxID=1206466 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Wickerhamomyces.;" source="Wickerhamomyces ciferrii (strain F-60-10 / ATCC 14091 / CBS 111 / JCM; 3599 / NBRC 0793 / NRRL Y-1031) (Yeast) (Pichia ciferrii).;"
RpL23A; ribosomal protein L23A
scnpilot_solids2_trim150_scaffold_1224_curated_3
unknown

Not on your lists

1185..1772
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1224_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1850..3475)
DNA (1626bp) protein (542aa)
alkylglycerone-phosphate synthase (EC:2.5.1.26); K00803 alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
Alkylglycerone-phosphate synthase {ECO:0000313|EMBL:ADB53818.1}; EC=2.5.1.26 {ECO:0000313|EMBL:ADB53818.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Alkylglycerone-phosphate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZI0_CONWI
scnpilot_solids2_trim150_scaffold_1224_curated_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3472..3927)
DNA (456bp) protein (152aa)
Polyketide cyclase/dehydrase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZE1_CONWI
polyketide cyclase/dehydrase
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:ADB51906.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3934..4683)
DNA (750bp) protein (250aa)
Transcriptional regulator, MerR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZE3_CONWI
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADB51908.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4683..5159)
DNA (477bp) protein (159aa)
FHA domain containing protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZE4_CONWI
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ADB51909.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_8

Not on your lists

comp(5174..5434)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBF0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KKL95920.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1224_curated_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5574..6221)
DNA (648bp) protein (216aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-alcohol phosphatidyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZE6_CONWI
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ADB51911.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_10
unknown

Not on your lists

6487..7065
DNA (579bp) protein (193aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1224_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7052..8308)
DNA (1257bp) protein (419aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZF0_CONWI
scnpilot_solids2_trim150_scaffold_1224_curated_12
unknown

Not on your lists

8513..8659
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1224_curated_13

Not on your lists

8902..15858
DNA (6957bp) protein (2319aa)
RHS repeat-associated core domain protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7EWI1_9ACTO
Putative large secreted protein {ECO:0000313|EMBL:AKA59505.1}; TaxID=1630017 species="Bacteria; environmental samples.;" source="uncultured bacterium NM_1663.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1224_curated_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15884..16984)
DNA (1101bp) protein (367aa)
peptidase M50; K11749 regulator of sigma E protease [EC:3.4.24.-]
peptidase M50 n=1 Tax=Patulibacter americanus RepID=UPI0003B6FEB8
Peptidase M50 {ECO:0000313|EMBL:ADB51927.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16981..18126)
DNA (1146bp) protein (382aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubroba
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F068_CONWI
scnpilot_solids2_trim150_scaffold_1224_curated_16
unknown

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comp(18275..18445)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1224_curated_17
unknown

Not on your lists

comp(18435..18776)
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1224_curated_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18946..21546
DNA (2601bp) protein (867aa)
Chaperone protein HtpG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJX5_9PROT
Chaperone protein HtpG {ECO:0000313|EMBL:CCU63114.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
molecular chaperone of HSP90 family
scnpilot_solids2_trim150_scaffold_1224_curated_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(21553..22446)
DNA (894bp) protein (298aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
Phosphatidate cytidylyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F070_CONWI
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:ADB51930.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_20
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(22446..23141)
DNA (696bp) protein (232aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
Isoprenyl transferase n=1 Tax=Patulibacter medicamentivorans RepID=H0E779_9ACTN
scnpilot_solids2_trim150_scaffold_1224_curated_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23142..23705)
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F072_CONWI
ribosome recycling factor; K02838 ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23718..24449)
DNA (732bp) protein (244aa)
uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22]
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Uridylate kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F073_CONWI
scnpilot_solids2_trim150_scaffold_1224_curated_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(24489..25097)
DNA (609bp) protein (203aa)
Elongation factor Ts n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F074_CONWI
translation elongation factor Ts; K02357 elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


comp(25097..26200)
DNA (1104bp) protein (368aa)
30S ribosomal protein S2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F075_CONWI
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_25
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26539..27213)
DNA (675bp) protein (225aa)
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
pseudouridine synthase n=1 Tax=Patulibacter americanus RepID=UPI0003B6EE4D
Tax=RBG_13_Actinobacteria_63_9_curated
scnpilot_solids2_trim150_scaffold_1224_curated_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(27203..27676)
DNA (474bp) protein (158aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Lipoprotein signal peptidase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F077_CONWI
scnpilot_solids2_trim150_scaffold_1224_curated_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(27673..27987)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F078_CONWI
hypothetical protein; K02221 YggT family protein
Uncharacterized protein {ECO:0000313|EMBL:ADB51938.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(27984..28691)
DNA (708bp) protein (236aa)
Pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Pyrroline-5-carboxylate reductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F079_CONWI
scnpilot_solids2_trim150_scaffold_1224_curated_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(28869..29783)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3B8_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50398.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1224_curated_30
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(29783..30346)
DNA (564bp) protein (188aa)
Cell division protein SepF n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F080_CONWI
hypothetical protein; K09772 cell division inhibitor SepF
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying items 1-30 of 34 in total

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