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scnpilot_solids2_trim150_scaffold_1150_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1150_curated_1
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

659..1756
DNA (1098bp) protein (366aa)
transposase is116/is110/is902 family protein id=14630003 bin=bin8_Chloro species=Micromonospora sp. genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
transposase IS116/IS110/IS902 family protein
Tax=CSP1_4_Chloroflexi
scnpilot_solids2_trim150_scaffold_1150_curated_2
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2137..3597
DNA (1461bp) protein (487aa)
Nicotinate phosphoribosyltransferase n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TTR8_9NOCA
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:ELB94510.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
nicotinamide phosphoribosyltransferase
scnpilot_solids2_trim150_scaffold_1150_curated_3
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3630..4310
DNA (681bp) protein (227aa)
HAD-superfamily hydrolase, subfamily IB family protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J2J3T0_9NOCA
Haloacid dehalogenase {ECO:0000313|EMBL:AII10589.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
haloacid dehalogenase
scnpilot_solids2_trim150_scaffold_1150_curated_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4307..5356
DNA (1050bp) protein (350aa)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:EHN09816.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EHN09816.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase n=1 Tax=Patulibacter medicamentivorans RepID=H0E938_9ACTN
scnpilot_solids2_trim150_scaffold_1150_curated_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5368..6384
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037F1487
F420-dependent oxidoreductase
F420-dependent oxidoreductase, G6PDH family {ECO:0000313|EMBL:ADB52517.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1150_curated_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6515..6916)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JIG9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE75043.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein; K06966
scnpilot_solids2_trim150_scaffold_1150_curated_7
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7120..8748
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI000361ECBD
Cell surface protein {ECO:0000313|EMBL:AKB12971.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1150_curated_8
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8822..9118
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYJ1_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE15979.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
scnpilot_solids2_trim150_scaffold_1150_curated_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9195..9737
DNA (543bp) protein (181aa)
GCN5-related N-acetyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEN9_CONWI
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADB49713.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1150_curated_10
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9715..10128)
DNA (414bp) protein (138aa)
glyoxalase n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036C496C
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEF42648.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
scnpilot_solids2_trim150_scaffold_1150_curated_11
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10178..10615)
DNA (438bp) protein (146aa)
Transcriptional regulator, AraC family n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B2D1_FRADG
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEH10808.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
scnpilot_solids2_trim150_scaffold_1150_curated_12
unknown

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comp(10656..11063)
DNA (408bp) protein (136aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1150_curated_13
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11080..11955
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MES0_9NOCA
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ETT24284.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1150_curated_14
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12022..12357
DNA (336bp) protein (112aa)
RNA methyltransferase TrmH, group 3 n=1 Tax=Mycobacterium abscessus subsp. bolletii 50594 RepID=R4UH26_MYCAB
Uncharacterized protein {ECO:0000313|EMBL:CCH71795.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
RNA methyltransferase TrmH, group 3
scnpilot_solids2_trim150_scaffold_1150_curated_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12428..13066)
DNA (639bp) protein (213aa)
SNARE associated Golgi protein-related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F435_CONWI
hypothetical protein
SNARE associated Golgi protein-related protein {ECO:0000313|EMBL:ADB48518.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1150_curated_16
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(13114..13488)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B38465
Xre family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
scnpilot_solids2_trim150_scaffold_1150_curated_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14041..14688
DNA (648bp) protein (216aa)
DNA-binding response regulator TcrA n=1 Tax=Patulibacter medicamentivorans RepID=H0E3K5_9ACTN
DNA-binding response regulator TcrA {ECO:0000313|EMBL:EHN11756.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
two component transcriptional regulator
scnpilot_solids2_trim150_scaffold_1150_curated_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14733..16076
DNA (1344bp) protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F655_CONWI
integral membrane sensor signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_1150_curated_19
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16073..16852
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QIA5_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU74982.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
scnpilot_solids2_trim150_scaffold_1150_curated_20
unknown

Not on your lists

16852..17142
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1150_curated_21
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17160..17375
DNA (216bp) protein (72aa)
Transcriptional regulator, PadR family n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JL11_STREN
transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CCB72531.1}; Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:AEW98409.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
scnpilot_solids2_trim150_scaffold_1150_curated_22
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17372..18265
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HB56_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EJY55697.1}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum URH17-3-68.;"
scnpilot_solids2_trim150_scaffold_1150_curated_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18353..18748
DNA (396bp) protein (132aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIV6_PSEUX
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA22935.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying 23 items

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