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scnpilot_solids2_trim150_scaffold_3350_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3350_curated_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(148..618)
DNA (471bp) protein (157aa)
Cytochrome c biogenesis protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F835_CONWI
cytochrome C biogenesis protein; K02200 cytochrome c-type biogenesis protein CcmH
Cytochrome c biogenesis protein {ECO:0000313|EMBL:ADB52929.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_3350_curated_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(645..1175)
DNA (531bp) protein (177aa)
redoxin domain-containing protein id=24451261 bin=RBG_19FT_COMBO_GAL15_69_19 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
redoxin
Tax=RBG_16_Actinobacteria_68_12_curated
scnpilot_solids2_trim150_scaffold_3350_curated_3
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1250..1870)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L8U6_9ACTO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EKX69219.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_3350_curated_4
unknown

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1951..2076
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3350_curated_5
unknown

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2266..2556
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3350_curated_6
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2614..2883
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE899
Uncharacterized protein {ECO:0000313|EMBL:KGN32735.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3350_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3024..3395
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC08_CONWI
hypothetical protein; K06886 hemoglobin
Uncharacterized protein {ECO:0000313|EMBL:ADB51423.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_3350_curated_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3392..4342)
DNA (951bp) protein (317aa)
Quinone oxidoreductase {ECO:0000313|EMBL:EHN12815.1}; EC=1.6.5.5 {ECO:0000313|EMBL:EHN12815.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Quinone oxidoreductase n=1 Tax=Patulibacter medicamentivorans RepID=H0E0J6_9ACTN
NAD(P)H quinone oxidoreductase
scnpilot_solids2_trim150_scaffold_3350_curated_9
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4391..4738)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B8X4_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH52127.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
scnpilot_solids2_trim150_scaffold_3350_curated_10
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4728..5072)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Brevibacterium linens RepID=UPI0000510315
Uncharacterized protein {ECO:0000313|EMBL:CDO23732.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3350_curated_11
unknown

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5098..5526
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3350_curated_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5523..5945
DNA (423bp) protein (141aa)
anti-sigma regulatory factor, serine/threonine protein kinase; K04757 anti-sigma B factor [EC:2.7.11.1]
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8Y1_CONWI
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ADB52976.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_3350_curated_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5968..6510
DNA (543bp) protein (181aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBF5_CONWI
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:ADB49324.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_3350_curated_14
unknown

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comp(6605..6844)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3350_curated_15
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6931..7065
DNA (135bp) protein (45aa)
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Pseudoclavibacter faecalis RepID=UPI0003752EDB
luciferase-like monooxygenase
5,10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:KJK33490.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
Displaying 15 items

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