ggKbase home page

scnpilot_solids2_trim150_scaffold_3132_curated_1

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(110..1102)

Top 3 Functional Annotations

Value Algorithm Source
pdhB; protein PdhB (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 320.0
  • Bit_score: 349
  • Evalue 1.20e-93
Transketolase domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3CU96_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 318.0
  • Bit_score: 475
  • Evalue 3.40e-131
Transketolase domain protein {ECO:0000313|EMBL:EFC85795.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 318.0
  • Bit_score: 475
  • Evalue 4.80e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 993
GTGAGCGTCGAGACCGAGCGGATCGGTTACGCGTGGGCGATCAACCACGCCCTCGCCGAGGAGATGCGGCGTGACCCGCGGGTCTGGATGATGGGACAGGACATCGGCAGGATGGGCGGCGTCTTCGGCGTCACCCGCGGCCTCTTCGACGAGTTCGGGCCGGCGCGCGTGCGCGACACGACGATCAACGAGACCTTCATCGTCGGCGGTGCGGCGGGGGCGGCGATGACCGGGACGATCCCGGTGGTCGAGCTGCAGTTCGCCGACTTCGGCCTGGTCGCCGGAGACGAGATCTTCCACAAGCTCGCCAAGTGGCGCTACATGCACGGCGGCAAGCTCGAACTGCCGGCGGTGGTCCGCCTGCCGACCGGCGTCGTCGGCGGCGCCGGCGCCGAACACTCGCAGAGCCTGGAGGCGATGGGGATGCACGTCCCGGGCCTCAAAGTCGCCCTCCCGGCGACGCCCGCCGACGCCAAGGGTCTGCTGAAGAGCGCGATCCGCGATCCCAACCCGGTCCTCTTCTTCGAACACAAGGGCCTCTACCGGGTAAAGGGCGAGGTGCCGACGAGCGACGATTACCTGGTCCCGTTCGGCGAGGCCGCGATCCGCCGCCGCGGCGACGCGGCGACCGTGGTGGCGACCGGCCTGATGGTCGGCCGCGCCCTCGAGGCGGCCGAGGCGCTCGCCGCCGAGGACATCGAGCTCGAGGTGATCGACCCCCGCACCCTCGTCCCCCTCGACATGGACACCATCATCGCCTCGGTGGAGCGCACCGGCCGCGCCTTGGTCGTCCACGAGGCGGTCCGCACCGCCGGCGCCGGCGCCGAGATCGCCGCCCGCATCCAAGAAGCCGCCTTCTTCGCCCTCGATGCCCCCGTCTGGCGCCTCGGCGCCCTAGACACCCCGATCCCCCAGGACCCGGAGCTGGAGCAGCTCGTCATCCCGAGTGCAGCTCAGATCGAGGTGGCTGTCCGGGAGTTGGTGGGGCTTTAG
PROTEIN sequence
Length: 331
VSVETERIGYAWAINHALAEEMRRDPRVWMMGQDIGRMGGVFGVTRGLFDEFGPARVRDTTINETFIVGGAAGAAMTGTIPVVELQFADFGLVAGDEIFHKLAKWRYMHGGKLELPAVVRLPTGVVGGAGAEHSQSLEAMGMHVPGLKVALPATPADAKGLLKSAIRDPNPVLFFEHKGLYRVKGEVPTSDDYLVPFGEAAIRRRGDAATVVATGLMVGRALEAAEALAAEDIELEVIDPRTLVPLDMDTIIASVERTGRALVVHEAVRTAGAGAEIAARIQEAAFFALDAPVWRLGALDTPIPQDPELEQLVIPSAAQIEVAVRELVGL*