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scnpilot_solids2_trim150_scaffold_3132_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3132_curated_1
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(110..1102)
DNA (993bp) protein (331aa)
pdhB; protein PdhB (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Transketolase domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3CU96_9ACTO
Transketolase domain protein {ECO:0000313|EMBL:EFC85795.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
scnpilot_solids2_trim150_scaffold_3132_curated_2
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1173..2156)
DNA (984bp) protein (328aa)
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:EFC85794.1}; EC=1.2.4.1 {ECO:0000313|EMBL:EFC85794.1};; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
pyruvate dehydrogenase; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Frankia sp. EUN1f RepID=D3CU95_9ACTO
scnpilot_solids2_trim150_scaffold_3132_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2218..2958
DNA (741bp) protein (247aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD24_CONWI
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB51536.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_3132_curated_4
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2955..3737
DNA (783bp) protein (261aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55); K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
Probable 3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:ABH00682.1}; EC=4.2.1.55 {ECO:0000313|EMBL:ABH00682.1};; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
Probable 3-hydroxybutyryl-CoA dehydratase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RVK4_RHOSR
scnpilot_solids2_trim150_scaffold_3132_curated_5
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3741..4898
DNA (1158bp) protein (386aa)
isovaleryl-CoA dehydrogenase; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
Possible isovaleryl-CoA dehydrogenase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RVK7_RHOSR
Possible isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:ABH00679.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
scnpilot_solids2_trim150_scaffold_3132_curated_6
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4934..5605
DNA (672bp) protein (224aa)
Transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=D9V7A6_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:EFL07299.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_3132_curated_7
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6550..7335)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E847_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ62387.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3132_curated_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7431..7688
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GTN0_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig162, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51937.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
short-chain dehydrogenase/reductase SDR
Displaying 8 items

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