ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_1324_curated_7

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(7570..8580)

Top 3 Functional Annotations

Value Algorithm Source
Ribose ABC transport system permease protein RbsC (TC 3.A.1.2.1) n=1 Tax=Patulibacter medicamentivorans RepID=H0E721_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 323.0
  • Bit_score: 369
  • Evalue 2.70e-99
Ribose ABC transport system permease protein RbsC (TC 3.A.1.2.1) {ECO:0000313|EMBL:EHN10516.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 323.0
  • Bit_score: 369
  • Evalue 3.80e-99
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 340.0
  • Bit_score: 230
  • Evalue 8.00e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGACCTCGACCACCGTCGACACCGCCGCCGCGCGCCCCGCGGTGCCGTCGCTGCGCCGGCTCCTCGCCAACTCCGGCATCTCGCTGACCGCGGTGACGACGGCGACGATCCTGATCGTCCTCGCGGTCACCGACTTCATCCTCCAGCCCGCCCTGCTGGACGTCACCGAACTCGGTTACCTGGCGCAGACGGCGCTGCCGCTGGTCCTCGTCGGCGCCGCCCAGACCCTGGTCGTGCTGGTCCGCGGGATCGACCTCTCGGTCGGCGGGATCATGGTCCTCGCCAACACCACGACCGCGGTCTGGGTCGGCGAACAGGGGGGCAACCACCAGCTGCTGGTCTTCGCGATCCTCGGCCTCGCCGCCTGCGCCGGCCTCCTCAACGGCCTGCTCGTCGCGGTCGGCGGCTTCGAGCCCTTCGTCGCCACCCTCGGCACCTGGACGATCTTCAACGGCCTCGCGCTCAAGGTGCTGCCGACCGACGGCGGCGCCCCGCCGCCGAGCCTGATCAACTTCGTCTTCGGCAAGACGGCGGGCATCCCCAACTCGTTCCTCGTCCTCGCCGGGGTGTTCGTGGTCTGGCGGATCCTGCGCGCCAGCAAGCTGGGGACGCGGATCTACGCGGTCGGCGCCGACGAGGAGCGGGCGCGGCTGAACGGCACCTCGGTGGTCGGCGTGAAGCTCTTCGTCTACGCGCTGGCCGGGCTCTGCGCCGGGATCGCCGGGGTGCTGCTCGCGGGCGTCGCCTCGAGCGGCACGCCGACCGCCGGCGACCCCTACATCCTCACCTCGGTCGCCGCGGTGGTGATCGGCGGCACCAGCCTGGCGGGCGGCAAGGGCGGCATCGGGCTGACGATGATGGCCGCCGGCGCCCTCGTCTTCATCTCCGACATCGTCACCGAGGTCAACCTCGAAACCTGGGTTTCGGTCGCCGCCTCCTCCGGCCTCCTGCTGGCGGTGGTGATCGTGCGCTCGCTGATCGACCGCGTCGCCGAGCGGAGGAGCGCATGA
PROTEIN sequence
Length: 337
MTSTTVDTAAARPAVPSLRRLLANSGISLTAVTTATILIVLAVTDFILQPALLDVTELGYLAQTALPLVLVGAAQTLVVLVRGIDLSVGGIMVLANTTTAVWVGEQGGNHQLLVFAILGLAACAGLLNGLLVAVGGFEPFVATLGTWTIFNGLALKVLPTDGGAPPPSLINFVFGKTAGIPNSFLVLAGVFVVWRILRASKLGTRIYAVGADEERARLNGTSVVGVKLFVYALAGLCAGIAGVLLAGVASSGTPTAGDPYILTSVAAVVIGGTSLAGGKGGIGLTMMAAGALVFISDIVTEVNLETWVSVAASSGLLLAVVIVRSLIDRVAERRSA*