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scnpilot_solids2_trim150_scaffold_1324_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1324_curated_1
unknown

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184..1350
DNA (1167bp) protein (389aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1324_curated_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(1265..3028)
DNA (1764bp) protein (588aa)
Acetolactate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF53_CONWI
acetolactate synthase large subunit
Tax=RBG_16_Actinobacteria_67_10_curated
scnpilot_solids2_trim150_scaffold_1324_curated_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3327..4412)
DNA (1086bp) protein (362aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:EHN10520.1}; EC=1.1.1.85 {ECO:0000313|EMBL:EHN10520.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
tartrate dehydrogenase n=1 Tax=Patulibacter americanus RepID=UPI0003B664CA
putative isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase ttuC
scnpilot_solids2_trim150_scaffold_1324_curated_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4409..5785)
DNA (1377bp) protein (459aa)
Aldehyde dehydrogenase {ECO:0000313|EMBL:EHN10519.1}; EC=1.2.1.3 {ECO:0000313|EMBL:EHN10519.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
betaine-aldehyde dehydrogenase; K00130 betaine-aldehyde dehydrogenase [EC:1.2.1.8]
aldehyde dehydrogenase n=1 Tax=Patulibacter americanus RepID=UPI0003B3C3C8
scnpilot_solids2_trim150_scaffold_1324_curated_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(5782..6570)
DNA (789bp) protein (263aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EHN10518.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EHN10518.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Patulibacter medicamentivorans RepID=H0E723_9ACTN
scnpilot_solids2_trim150_scaffold_1324_curated_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(6560..7573)
DNA (1014bp) protein (338aa)
Ribose ABC transport system permease protein RbsC (TC 3.A.1.2.1) n=1 Tax=Patulibacter medicamentivorans RepID=H0E722_9ACTN
Ribose ABC transport system permease protein RbsC (TC 3.A.1.2.1) {ECO:0000313|EMBL:EHN10517.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_1324_curated_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7570..8580)
DNA (1011bp) protein (337aa)
Ribose ABC transport system permease protein RbsC (TC 3.A.1.2.1) n=1 Tax=Patulibacter medicamentivorans RepID=H0E721_9ACTN
Ribose ABC transport system permease protein RbsC (TC 3.A.1.2.1) {ECO:0000313|EMBL:EHN10516.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
inner-membrane translocator
scnpilot_solids2_trim150_scaffold_1324_curated_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(8577..10151)
DNA (1575bp) protein (525aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Ribose ABC transport system ATP-binding protein RbsA (TC 3.A.1.2.1) n=1 Tax=Patulibacter medicamentivorans RepID=H0E720_9ACTN
Ribose ABC transport system ATP-binding protein RbsA (TC 3.A.1.2.1) {ECO:0000313|EMBL:EHN10515.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
scnpilot_solids2_trim150_scaffold_1324_curated_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(10148..11308)
DNA (1161bp) protein (387aa)
Ribose ABC transporter substrate-binding protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E719_9ACTN
Ribose ABC transporter substrate-binding protein {ECO:0000313|EMBL:EHN10514.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
sugar ABC transporter substrate-binding protein
scnpilot_solids2_trim150_scaffold_1324_curated_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(11385..13571)
DNA (2187bp) protein (729aa)
N-methylhydantoinase B {ECO:0000313|EMBL:EHN10513.1}; EC=3.5.2.14 {ECO:0000313|EMBL:EHN10513.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14]
N-methylhydantoinase B n=1 Tax=Patulibacter medicamentivorans RepID=H0E718_9ACTN
scnpilot_solids2_trim150_scaffold_1324_curated_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(13586..15697)
DNA (2112bp) protein (704aa)
N-methylhydantoinase A {ECO:0000313|EMBL:EHN10512.1}; EC=3.5.2.14 {ECO:0000313|EMBL:EHN10512.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
N-methylhydantoinase A n=1 Tax=Patulibacter medicamentivorans RepID=H0E717_9ACTN
scnpilot_solids2_trim150_scaffold_1324_curated_12
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15694..16365)
DNA (672bp) protein (224aa)
GntR family transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B5396A
GntR family transcriptional regulator {ECO:0000313|EMBL:EHP43057.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
GntR family transcriptional regulator
Displaying 12 items

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