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scnpilot_solids2_trim150_scaffold_155_curated

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_155_curated_1
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..371
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F317A5
Acyl-CoA synthetase {ECO:0000313|EMBL:KEO90613.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
long-chain-fatty-acid--CoA ligase
scnpilot_solids2_trim150_scaffold_155_curated_2
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

673..3066
DNA (2394bp) protein (798aa)
TonB-dependent receptor n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KV78_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EED36302.1}; TaxID=565045 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1B.;"
TonB-dependent receptor
scnpilot_solids2_trim150_scaffold_155_curated_3
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3232..5622
DNA (2391bp) protein (797aa)
TonB-dependent receptor n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KV78_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EED36302.1}; TaxID=565045 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1B.;"
TonB-dependent receptor
scnpilot_solids2_trim150_scaffold_155_curated_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5713..6744)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS64_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62747.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_155_curated_5
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6963..7541
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S3H1_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EEB76773.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
scnpilot_solids2_trim150_scaffold_155_curated_6
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7547..8701
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYL1_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EEB78693.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
glutathione S-transferase
scnpilot_solids2_trim150_scaffold_155_curated_7
marine gamma proteobacterium HTCC2080, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8704..9996
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D02B7
Major facilitator superfamily transporter {ECO:0000313|EMBL:EAW39477.1}; TaxID=247639 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2080.;"
major facilitator superfamily transporter
scnpilot_solids2_trim150_scaffold_155_curated_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9999..10667
DNA (669bp) protein (223aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase family protein {ECO:0000313|EMBL:CCE95240.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CCE95240.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
glutathione S-transferase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A85ACA
scnpilot_solids2_trim150_scaffold_155_curated_9
marine gamma proteobacterium HTCC2080, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10962..12299
DNA (1338bp) protein (446aa)
Major facilitator superfamily transporter n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z998_9GAMM
Major facilitator superfamily transporter {ECO:0000313|EMBL:EAW39477.1}; TaxID=247639 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2080.;"
major facilitator superfamily transporter
scnpilot_solids2_trim150_scaffold_155_curated_10
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12296..12871)
DNA (576bp) protein (192aa)
putative methyltransferase; K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
DNA methyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SDF9_9RHIZ
DNA methyltransferase {ECO:0000313|EMBL:AHB48095.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
scnpilot_solids2_trim150_scaffold_155_curated_11
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12873..13880)
DNA (1008bp) protein (336aa)
alcohol dehydrogenase (EC:1.3.1.74); K07119
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000346EDEA
Putative oxidoreductase YncB {ECO:0000313|EMBL:CDO60219.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
scnpilot_solids2_trim150_scaffold_155_curated_12
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13982..16093
DNA (2112bp) protein (704aa)
Thiol:disulfide interchange protein DsbD, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRI6_RHOCS
dsbD; thiol:disulfide interchange protein DsbD
Thiol:disulfide interchange protein DsbD, putative {ECO:0000313|EMBL:ACI98072.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
scnpilot_solids2_trim150_scaffold_155_curated_13
unknown

Not on your lists

comp(16438..16992)
DNA (555bp) protein (185aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_155_curated_14
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17078..17920)
DNA (843bp) protein (281aa)
phhA; phenylalanine 4-monooxygenase; K00500 phenylalanine-4-hydroxylase [EC:1.14.16.1]
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI000377104F
Phenylalanine-4-hydroxylase {ECO:0000313|EMBL:KJB90455.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
scnpilot_solids2_trim150_scaffold_155_curated_15
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18139..19209
DNA (1071bp) protein (357aa)
leucine dehydrogenase (EC:1.4.1.9); K00263 leucine dehydrogenase [EC:1.4.1.9]
Leucine dehydrogenase {ECO:0000313|EMBL:ACI99173.1}; EC=1.4.1.9 {ECO:0000313|EMBL:ACI99173.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Leucine dehydrogenase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITF5_RHOCS
scnpilot_solids2_trim150_scaffold_155_curated_16
unknown

Not on your lists

comp(19210..19404)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_155_curated_17
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19457..19618)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QS22_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57802.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_155_curated_18
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19701..20999)
DNA (1299bp) protein (433aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CC27_METED
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
glcF; glycolate oxidase iron-sulfur subunit; K11473 glycolate oxidase iron-sulfur subunit
scnpilot_solids2_trim150_scaffold_155_curated_19
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21005..22183)
DNA (1179bp) protein (393aa)
Putative glycolate oxidase subunit protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CB57_9RHOB
Putative glycolate oxidase subunit protein {ECO:0000313|EMBL:EAR49928.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
glcE; glycolate oxidase, subunit glcE; K11472 glycolate oxidase FAD binding subunit
scnpilot_solids2_trim150_scaffold_155_curated_20
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22191..23678)
DNA (1488bp) protein (496aa)
D-lactate dehydrogenase (EC:1.1.2.4); K00104 glycolate oxidase [EC:1.1.3.15]
D-lactate dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J2T2_9PROT
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:KGM35563.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
scnpilot_solids2_trim150_scaffold_155_curated_21
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23750..24124)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAB7_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_155_curated_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24313..25305
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D2F07
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:KGM34924.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
aminoglycoside phosphotransferase
scnpilot_solids2_trim150_scaffold_155_curated_23
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25302..26588
DNA (1287bp) protein (429aa)
phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11]
Enolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPW1_9SPHN
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_155_curated_24
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26585..27529
DNA (945bp) protein (315aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U2W3_9PROT
D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
scnpilot_solids2_trim150_scaffold_155_curated_25
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27529..28227
DNA (699bp) protein (233aa)
Alpha/beta hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAA8_9SPHN
hydrolase, alpha
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids2_trim150_scaffold_155_curated_26
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28224..29258)
DNA (1035bp) protein (345aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
Vitamin-B12 independent methionine synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYQ6_9SPHN
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_155_curated_27
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29387..29932
DNA (546bp) protein (182aa)
Transcriptional regulator, MarR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GS02_SPHAL
MarR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_155_curated_28
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29938..30417)
DNA (480bp) protein (160aa)
Small subunit of phenylpropionate dioxygenase n=1 Tax=Polaromonas sp. CF318 RepID=J3D0P9_9BURK
Salicylate-5-hydroxylase small oxygenase NagH {ECO:0000313|EMBL:ETX01564.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA
scnpilot_solids2_trim150_scaffold_155_curated_29
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30414..31646)
DNA (1233bp) protein (411aa)
Aromatic-ring-hydroxylating dioxygenase, alpha subunit; K05708 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha [EC:1.14.12.19]
Aromatic-ring-hydroxylating dioxygenase, alpha subunit n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDV6_AZOL4
Salicylate 5-hydroxylase large oxygenase NagG {ECO:0000313|EMBL:ETX01563.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
scnpilot_solids2_trim150_scaffold_155_curated_30
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(31669..32565)
DNA (897bp) protein (299aa)
dihydrodipicolinate synthase, putative (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|PIRNR:PIRNR001365}; Short=HTPA synthase {ECO:0000256|PIRNR:PIRNR001365};; EC=4.3.3.7 {ECO:0000256|PIRNR:PIRNR001365};; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
Dihydrodipicolinate synthase, putative n=1 Tax=Ricinus communis RepID=B9TF72_RICCO
Displaying items 1-30 of 117 in total

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