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scnpilot_solids2_trim150_scaffold_401_curated

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_401_curated_1
unknown

Not on your lists

253..930
DNA (678bp) protein (226aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_401_curated_2
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1225..1587)
DNA (363bp) protein (121aa)
Response regulator receiver protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUM9_PARL1
Response regulator {ECO:0000313|EMBL:CDO58990.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
response regulator receiver protein; K13589 two-component system, cell cycle response regulator CpdR
scnpilot_solids2_trim150_scaffold_401_curated_3
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1819..2832
DNA (1014bp) protein (338aa)
N-formylglutamate amidohydrolase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ISX8_METNO
N-formylglutamate amidohydrolase
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:ACL60777.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_solids2_trim150_scaffold_401_curated_4
unknown

Not on your lists

comp(2900..3259)
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_401_curated_5
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3715..4617
DNA (903bp) protein (301aa)
Ser/Thr protein phosphatase family protein,UDP-2,3-diacylglucosamine hydrolase homolog {ECO:0000313|EMBL:CDO58995.1}; EC=3.6.1.54 {ECO:0000313|EMBL:CDO58995.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Metallophosphoesterase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUM4_PARL1
metallophosphoesterase
scnpilot_solids2_trim150_scaffold_401_curated_6
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4628..5695
DNA (1068bp) protein (356aa)
Glycosyl transferase|GT4 {ECO:0000313|EMBL:CDO58996.1}; EC=2.4.-.- {ECO:0000313|EMBL:CDO58996.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
GDP-mannose-dependent alpha-mannosyltransferase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003817F60
group 1 glycosyl transferase
scnpilot_solids2_trim150_scaffold_401_curated_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5812..7515
DNA (1704bp) protein (568aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1K9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJB96081.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
conserved membrane protein of unknown function
scnpilot_solids2_trim150_scaffold_401_curated_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7512..8489
DNA (978bp) protein (326aa)
glycosyl transferase family protein (EC:2.4.1.-)
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ACI99587.1}; EC=2.4.1.- {ECO:0000313|EMBL:ACI99587.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Glycosyl transferase, group 2 family protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IP85_RHOCS
scnpilot_solids2_trim150_scaffold_401_curated_9
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8486..8953
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9B0_AZOL4
hypothetical protein
Tax=CG_Delta_06
scnpilot_solids2_trim150_scaffold_401_curated_10
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9051..9605)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000370639B
Uncharacterized protein {ECO:0000313|EMBL:EJN08938.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_401_curated_11
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9722..10798)
DNA (1077bp) protein (359aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705};; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
molybdate ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
Molybdenum transport ATP-binding protein ModC n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9R4L7_9RHOB
scnpilot_solids2_trim150_scaffold_401_curated_12
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10795..11487)
DNA (693bp) protein (231aa)
Molybdate ABC transporter permease protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MM33_9PROT
Molybdate ABC transporter permease protein {ECO:0000313|EMBL:AJD53322.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
modB; molybdate ABC transporter; permease component; K02018 molybdate transport system permease protein
scnpilot_solids2_trim150_scaffold_401_curated_13
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11606..12865)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRN3_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI98119.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
scnpilot_solids2_trim150_scaffold_401_curated_14
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12958..13383)
DNA (426bp) protein (142aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VVG8_9BURK
Biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
scnpilot_solids2_trim150_scaffold_401_curated_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13427..13870)
DNA (444bp) protein (148aa)
biopolymer transporter ExbD n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B3981E
exbD; biopolymer transport ExbD protein; K03559 biopolymer transport protein ExbD
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
scnpilot_solids2_trim150_scaffold_401_curated_16
Komagataeibacter intermedius, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13918..14823)
DNA (906bp) protein (302aa)
TonB-dependent biopolymer transporter integral cytoplasmic membrane subunit ExbB/TolQ/MotA n=1 Tax=Gluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693) RepID=G2I0G9_GLUXN
Biopolymer transporter ExbB {ECO:0000313|EMBL:KIE62961.1}; TaxID=1458464 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter intermedius AF2.;"
TonB-dependent biopolymer transporter integral cytoplasmic membrane subunit ExbB/TolQ/MotA; K03561 biopolymer transport protein ExbB
scnpilot_solids2_trim150_scaffold_401_curated_17
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14878..15447)
DNA (570bp) protein (190aa)
energy transducer TonB n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B6CC88
TonB family protein; K03832 periplasmic protein TonB
TonB family protein {ECO:0000313|EMBL:ABS62618.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_401_curated_18
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16183..16623
DNA (441bp) protein (147aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFI3_METS4
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACA14837.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids2_trim150_scaffold_401_curated_19
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16680..17711
DNA (1032bp) protein (344aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5]
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Threonine aldolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUJ8_PARL1
scnpilot_solids2_trim150_scaffold_401_curated_20
unknown

Not on your lists

17806..18834
DNA (1029bp) protein (343aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_401_curated_21
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18873..22187)
DNA (3315bp) protein (1105aa)
transporter n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036F5F94
Transporter {ECO:0000313|EMBL:KFD29029.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
autotransporter beta-domain-containing protein
scnpilot_solids2_trim150_scaffold_401_curated_22
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

22479..23777
DNA (1299bp) protein (433aa)
Pentapeptide repeat protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SY18_CAUSK
Pentapeptide repeat protein {ECO:0000313|EMBL:KIF23259.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
pentapeptide repeat-containing protein
scnpilot_solids2_trim150_scaffold_401_curated_23
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24084..25019)
DNA (936bp) protein (312aa)
pldB; lysophospholipase (EC:3.1.1.5)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030299A2
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:GAK45710.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
scnpilot_solids2_trim150_scaffold_401_curated_24

Not on your lists

comp(25041..25367)
DNA (327bp) protein (109aa)
sterol-binding protein n=1 Tax=gamma proteobacterium SCGC AAA300-D14 RepID=UPI000377EEA4
Marine sediment metagenome DNA, contig: S12H4_S16411 {ECO:0000313|EMBL:GAJ09841.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sterol-binding domain-containing protein
scnpilot_solids2_trim150_scaffold_401_curated_25

Not on your lists

25645..26538
DNA (894bp) protein (298aa)
Lipase/esterase n=1 Tax=uncultured bacterium RepID=Q6RJM3_9BACT
Lipase/esterase {ECO:0000313|EMBL:AAS77233.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
alpha/beta hydrolase domain-containing protein
scnpilot_solids2_trim150_scaffold_401_curated_26
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26689..27129
DNA (441bp) protein (147aa)
heat-shock protein n=1 Tax=Aureimonas ureilytica RepID=UPI000372852D
Molecular chaperone {ECO:0000313|EMBL:KHJ56135.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
heat shock protein Hsp20; K04080 molecular chaperone IbpA
scnpilot_solids2_trim150_scaffold_401_curated_27

Not on your lists

27266..28180
DNA (915bp) protein (305aa)
Lipolytic enzyme {ECO:0000313|EMBL:AFB82687.1}; EC=3.1.1.- {ECO:0000313|EMBL:AFB82687.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Lipolytic enzyme n=1 Tax=uncultured bacterium RepID=H6BDW3_9BACT
Alpha/beta hydrolase fold-3 domain protein
scnpilot_solids2_trim150_scaffold_401_curated_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28185..28862)
DNA (678bp) protein (226aa)
glutathione S-transferase domain; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZUH4_RHILW
Glutathione S-transferase domain {ECO:0000313|EMBL:ACI54083.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
scnpilot_solids2_trim150_scaffold_401_curated_29
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29542..30351)
DNA (810bp) protein (270aa)
Putative inositol-1-monophosphatase n=1 Tax=Pseudomonas putida NBRC 14164 RepID=T2H8K4_PSEPU
putative inositol-1-monophosphatase
Putative inositol-1-monophosphatase {ECO:0000313|EMBL:BAN54381.1}; TaxID=1211579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida NBRC 14164.;"
scnpilot_solids2_trim150_scaffold_401_curated_30
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30471..31331
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3APB8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL34539.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
short-chain dehydrogenase/reductase SDR
Displaying items 1-30 of 66 in total

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