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scnpilot_solids2_trim150_scaffold_440_curated

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_440_curated_1
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..609)
DNA (609bp) protein (203aa)
Na+/solute symporter n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LEZ8_BURGS
Na+/solute symporter; K03307 solute:Na+ symporter, SSS family
Na+/solute symporter {ECO:0000313|EMBL:AEA61635.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
scnpilot_solids2_trim150_scaffold_440_curated_2
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(609..842)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFC5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE05163.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_440_curated_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(916..1716)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037B806B
molybdenum ABC transporter periplasmic molybdate-binding protein
Molybdenum ABC transporter periplasmic molybdate-binding protein {ECO:0000313|EMBL:AGK56647.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_440_curated_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1771..2220)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGN6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH08416.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
putative small integral membrane protein
scnpilot_solids2_trim150_scaffold_440_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2217..2438)
DNA (222bp) protein (74aa)
Putative uncharacterized protein id=2811811 bin=GWC2_Methylomirabilis_70_24 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
scnpilot_solids2_trim150_scaffold_440_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2645..2905
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035D32A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ05824.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
scnpilot_solids2_trim150_scaffold_440_curated_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2967..4481)
DNA (1515bp) protein (505aa)
Mg chelatase related protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5N7_9PROT
Mg chelatase related protein {ECO:0000313|EMBL:EKE78391.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein
scnpilot_solids2_trim150_scaffold_440_curated_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4642..5232)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y5W1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12889.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_440_curated_9
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5259..7214)
DNA (1956bp) protein (652aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y2S1_9PROT
Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC {ECO:0000313|EMBL:GAK34194.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_440_curated_10
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7284..8138
DNA (855bp) protein (285aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJJ8_CAUST
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:ADG10407.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
scnpilot_solids2_trim150_scaffold_440_curated_11
unknown

Not on your lists

8156..8752
DNA (597bp) protein (199aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_440_curated_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8832..10007
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGV2_PHEZH
hypothetical protein; K09989 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG77318.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids2_trim150_scaffold_440_curated_13
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10021..10620
DNA (600bp) protein (200aa)
Acetyltransferase n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5YWG8_MYCSD
N-acetyltransferase GCN5 {ECO:0000313|EMBL:CDO05770.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
acetyltransferase
scnpilot_solids2_trim150_scaffold_440_curated_14
unknown

Not on your lists

11432..11734
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_440_curated_15
Pseudomonas coronafaciens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11842..12465
DNA (624bp) protein (208aa)
putative glutathione S transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=F2ZKD4_9PSED
Glutathione S-transferase {ECO:0000313|EMBL:KGS14116.1}; TaxID=53409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas coronafaciens.;"
scnpilot_solids2_trim150_scaffold_440_curated_16
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12675..12932)
DNA (258bp) protein (86aa)
Methyltransferase type 11 n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXI6_9GAMM
SAM-dependent methyltransferase PA0798 (UbiE paralog) {ECO:0000313|EMBL:CDO58554.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
type 11 methyltransferase
scnpilot_solids2_trim150_scaffold_440_curated_17
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13162..13548)
DNA (387bp) protein (129aa)
Putative death-on-curing protein Doc n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CNN0_THIA3
Putative death-on-curing protein Doc
Putative death-on-curing protein Doc {ECO:0000313|EMBL:CAZ90158.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
scnpilot_solids2_trim150_scaffold_440_curated_18
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13545..13772)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2XFQ7_DELAC
Transcriptional regulator {ECO:0000313|EMBL:KEH11245.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
putative addiction module antidote
scnpilot_solids2_trim150_scaffold_440_curated_19
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14013..14321)
DNA (309bp) protein (103aa)
Ferredoxin n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNJ6_9PROT
Ferredoxin {ECO:0000313|EMBL:EDP65383.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ferredoxin; K04755 ferredoxin, 2Fe-2S
scnpilot_solids2_trim150_scaffold_440_curated_20
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14370..15398)
DNA (1029bp) protein (343aa)
Thioredoxin reductase (EC:1.8.1.9)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
Ferredoxin--NADP reductase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VD76_9PROT
scnpilot_solids2_trim150_scaffold_440_curated_21
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15582..15902
DNA (321bp) protein (107aa)
chorismate mutase, type II; K04782 isochorismate pyruvate lyase [EC:4.2.99.21]
Chorismate mutase, type II n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QKV5_BRESC
Chorismate mutase, type II {ECO:0000313|EMBL:ADL01769.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
scnpilot_solids2_trim150_scaffold_440_curated_22
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15916..16269)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE26_PHEZH
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:CDO58573.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_440_curated_23
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16332..17030)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDJ6_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78386.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids2_trim150_scaffold_440_curated_24
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17179..19743
DNA (2565bp) protein (855aa)
Apolipoprotein A1/A4/E n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAX7_9RHIZ
Apolipoprotein A1/A4/E
Apolipoprotein A1/A4/E {ECO:0000313|EMBL:AGK57681.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_440_curated_25
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19750..21057)
DNA (1308bp) protein (436aa)
sun protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Sun protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSR3_PARL1
Sun protein {ECO:0000313|EMBL:ABS62946.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_440_curated_26
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21054..21929)
DNA (876bp) protein (292aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
heat shock protein HtpX (EC:3.4.24.84); K03799 heat shock protein HtpX [EC:3.4.24.-]
Protease HtpX homolog n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSM9_9BRAD
scnpilot_solids2_trim150_scaffold_440_curated_27
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21992..22264
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UKC5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP88743.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_440_curated_28
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22341..22904
DNA (564bp) protein (188aa)
Fe-S cluster assembly protein NFU n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVV4_GRABC
Mitochondrial type Fe-S cluster assembly protein NFU {ECO:0000313|EMBL:AHJ61899.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Fe-S cluster assembly protein NFU
scnpilot_solids2_trim150_scaffold_440_curated_29
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22962..23552
DNA (591bp) protein (197aa)
hypothetical protein; K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
Putative NADH dehydrogenase/NAD(P)H nitroreductase Plav_3612 {ECO:0000255|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000255|HAMAP-Rule:MF_01204};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Putative NADH dehydrogenase/NAD(P)H nitroreductase Plav_3612 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=Y3612_PARL1
scnpilot_solids2_trim150_scaffold_440_curated_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23565..24272
DNA (708bp) protein (236aa)
peptidase M22, glycoprotease; K14742 hypothetical protease [EC:3.4.-.-]
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035CF21C
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EKS30048.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Displaying items 1-30 of 106 in total

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