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scnpilot_solids2_trim150_scaffold_273_curated

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_273_curated_1
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..95)
DNA (93bp) protein (31aa)
transglycosylase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DECE6F
Transglycosylase-associated protein {ECO:0000313|EMBL:GAN77403.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
transglycosylase
scnpilot_solids2_trim150_scaffold_273_curated_2
unknown

Not on your lists

comp(271..525)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_273_curated_3
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(591..1589)
DNA (999bp) protein (333aa)
Quinone oxidoreductase {ECO:0000313|EMBL:CDO59570.1}; EC=1.6.5.5 {ECO:0000313|EMBL:CDO59570.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
alcohol dehydrogenase zinc-binding domain-containing protein; K00344 NADPH2:quinone reductase [EC:1.6.5.5]
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VDR8_CAUST
scnpilot_solids2_trim150_scaffold_273_curated_4
unknown

Not on your lists

1857..2276
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_273_curated_5
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2273..3280)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000377EDBE
L-asparaginase {ECO:0000313|EMBL:KGJ17973.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
L-asparaginase II
scnpilot_solids2_trim150_scaffold_273_curated_6
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3472..4005
DNA (534bp) protein (178aa)
rRNA methyltransferase n=1 Tax=Woodsholea maritima RepID=UPI000362B834
Putative RNA methyltransferase of TrmH family {ECO:0000313|EMBL:GAM96717.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
putative tRNA/rRNA methyltransferase
scnpilot_solids2_trim150_scaffold_273_curated_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4007..4762)
DNA (756bp) protein (252aa)
Hydrolase, alpha/beta hydrolase fold family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA48_PHEZH
hydrolase, alpha/beta hydrolase fold family protein
Hydrolase, alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:ACG79552.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids2_trim150_scaffold_273_curated_8

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4959..6737
DNA (1779bp) protein (593aa)
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-]
Signal peptide peptidase SppA, 36K type n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0ARC7_MARMM
Signal peptide peptidase SppA {ECO:0000313|EMBL:AHN97614.1}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
scnpilot_solids2_trim150_scaffold_273_curated_9
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6830..8101
DNA (1272bp) protein (424aa)
Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHV1_PHEZH
aspartyl/asparaginyl beta-hydroxylase
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:ACG79142.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids2_trim150_scaffold_273_curated_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8086..9717)
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6B842
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_273_curated_11
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9915..13061)
DNA (3147bp) protein (1049aa)
TonB-dependent receptor, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IXP2_RHOCS
TonB-dependent receptor
TonB-dependent receptor, putative {ECO:0000313|EMBL:ACJ01066.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
scnpilot_solids2_trim150_scaffold_273_curated_12
unknown

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13383..13742
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_273_curated_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13823..14686
DNA (864bp) protein (288aa)
acetoin utilization protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B451FC
Histone deacetylase-like amidohydrolase {ECO:0000313|EMBL:EKE76478.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative deacetylase
scnpilot_solids2_trim150_scaffold_273_curated_14

Not on your lists

14689..14949
DNA (261bp) protein (87aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
exodeoxyribonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease VII small subunit n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGK2_9RHIZ
scnpilot_solids2_trim150_scaffold_273_curated_15

Not on your lists

15196..17121
DNA (1926bp) protein (642aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
1-deoxy-D-xylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR71_PARL1
scnpilot_solids2_trim150_scaffold_273_curated_16

Not on your lists

17150..18355
DNA (1206bp) protein (402aa)
RNA methyltransferase, TrmA family; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P8S8_9CAUL
(Uracil-5)-methyltransferase {ECO:0000313|EMBL:AHN97600.1}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
scnpilot_solids2_trim150_scaffold_273_curated_17
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18352..19122
DNA (771bp) protein (257aa)
Peptidase C13, legumain asparaginyl peptidase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VFS6_CAUST
asparaginyl peptidase
Peptidase C13, legumain asparaginyl peptidase {ECO:0000313|EMBL:ADG09808.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
scnpilot_solids2_trim150_scaffold_273_curated_18

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comp(19123..20223)
DNA (1101bp) protein (367aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
chorismate synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031C2045
scnpilot_solids2_trim150_scaffold_273_curated_19
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20235..20864)
DNA (630bp) protein (210aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IMJ9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83899.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
scnpilot_solids2_trim150_scaffold_273_curated_20

Not on your lists

comp(20854..21678)
DNA (825bp) protein (275aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
fabI2; NADH dependent enoyl-[acyl-carrier-protein] reductase; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5B1_9RHOB
scnpilot_solids2_trim150_scaffold_273_curated_21
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21819..23069
DNA (1251bp) protein (417aa)
Beta-lactamase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH32_PHEZH
Beta-lactamase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_273_curated_22
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

23140..23733
DNA (594bp) protein (198aa)
phosphoglycerate mutase; K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSJ7_OPITP
Phosphoglycerate mutase {ECO:0000313|EMBL:ACB73854.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
scnpilot_solids2_trim150_scaffold_273_curated_23

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comp(23855..24811)
DNA (957bp) protein (319aa)
molecular chaperone DnaJ n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003691CA6
Chaperone DnaJ {ECO:0000313|EMBL:AHN97596.1}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
chaperone DnaJ domain-containing protein
scnpilot_solids2_trim150_scaffold_273_curated_24
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24878..25492)
DNA (615bp) protein (205aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR78_PARL1
Sel1 domain-containing protein
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:ABS62411.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_273_curated_25
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25567..26193
DNA (627bp) protein (209aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
pyridoxamine 5'-phosphate oxidase; K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B7A19E
scnpilot_solids2_trim150_scaffold_273_curated_26
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26166..27092
DNA (927bp) protein (309aa)
Cation diffusion facilitator family transporter n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR81_PARL1
cation diffusion facilitator family transporter
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
scnpilot_solids2_trim150_scaffold_273_curated_27
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27144..27902
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1Y8_STAND
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:GAK46134.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids2_trim150_scaffold_273_curated_28
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28046..28861)
DNA (816bp) protein (272aa)
N-acetyltransferase; K00622 arylamine N-acetyltransferase [EC:2.3.1.5]
N-acetyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9S6_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KCZ48144.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
scnpilot_solids2_trim150_scaffold_273_curated_29
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28921..29970)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X728_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS17032.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
scnpilot_solids2_trim150_scaffold_273_curated_30
unknown

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comp(30185..30364)
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying items 1-30 of 83 in total

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