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scnpilot_solids2_trim150_scaffold_1372_curated_24

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 23883..25562

Top 3 Functional Annotations

Value Algorithm Source
choline dehydrogenase; K00108 choline dehydrogenase [EC:1.1.99.1] similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 543.0
  • Bit_score: 732
  • Evalue 1.10e-208
Glucose-methanol-choline oxidoreductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWG9_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 543.0
  • Bit_score: 732
  • Evalue 3.40e-208
Choline dehydrogenase {ECO:0000313|EMBL:GAK46046.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 544.0
  • Bit_score: 755
  • Evalue 5.30e-215

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Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1680
ATGGCTGTGGCGACCATGCAGACTTATGACTACATCATCATCGGTGCCGGCAGTGCGGGCTGCGTGCTGGCCAACCGGCTGTCCGCCGATTCAAAGGCGCAGGTTTTGCTGATCGAGGCGGGTGGCCGCGACAAATCGCTGATGATCCATATGCCGGCGGGAATTCCGGCACTTCTCGGCAAGCCCAACCCCTACAACTGGTATTACGAAACCGAAGGGCAACTGAACCTCAACAATCGCAGGCTTTACTGGCCGCGCGGCAAGGGCTGGGGCGGCTCCTCCTCCATCAACGGCATGATCTATATCCGCGGCCATGCGCGCGATTACGACCGCTGGCGCCAGATGGGCTGCGAAGGCTGGTCGTTTGCCGATGTATTGCCCTATTTCAAGCGCGCCGAAAGCAACGAGAACGGCGGCGACGATTTTCATGGCGCGGGCGGCCCGCTTCATGTTTCCAACGGGCGTTCCGCCAATCCGCTGTTCCGCGCCTTTGTGCGCGCCGGTGTCGAGGCCGGCCATGCCGCCACGCGTGATTTCAACGGTTTCGCGCAGGAAGGCTTCGGCCCCTATCAGTTCACCATTCACGACGGCAAACGCTGGAGCGCGGCCACCGCCTATCTGAAACCCATTCTGGAGCGGCCGAATCTCACCATCGAATCCCACGCGCAAGTCAGCCGCATCATTTTCGAAGGCGAACGCGCCGCCGGTGTCGAATTCGTGCAGAAGAAAGAGGTGGTGCATGTGCGCGCCGCACGCGAAGTCATCCTCTGCGGCGGTGCGGTGAACACACCGCAGGTGCTGATGCTCTCCGGCATCGGCCCGGCGGAGACCCTGAACCGTTTCGGCATCGACGTGGTGGCCGATCTCGACGGCGTGGGCCAGAATCTGCAGGACCATCTGGATTGTTCGATCCAGTATGAATGCACCCAGCCGATCACGCTTTACAGTCAGTCGAACCCGCTGAATGCGGCCAAAACCGGCTTGCAATATTTGCTGTTCGGCACCGGGCTTGCGACCGGACAGGGGCTTGAATCGGGCGCCTTCCTGAAAAGCCGCCCGGACCTCGAAACCCCGGACCTGCAATATCACTTCATCGCCGCCCTGATGTACGATCACACACGGCGCCGCGCCGACCGCCACGGCTTCATGGCCCATGTCTGCCAGTTGCGCCCGCAAAGCCGCGGCTTCATTTCGCTGAAATCCGCCGACCCGCTGGCGCCGCCGCTGATCCAGCCCAATTATCTGGAGGCCGAGGAAGACCGCCGCGCGTTGCGCGAAGGGGTGAAGATGGCGCGCGAGATTTTCGCGCAGAAGGCGTTCGATCCCTATCGCGGGCCGGAGCTGATGCCCGGCGCACAGGTCCGCAGCGATGAAGACATCGACACCTTCGTCCGCAAGACGGCCGAAACCATCTATCACCCGGTTGGCACCGCCAGGATGGGCACCGGCGATGGCGCGGTGGTGGACAGTCGGCTGCGCGTTTACGGCGTGGAGGGGTTGCGCGTGGTCGATGCCTCGGTGATGCCGTCACTGGTGTCGGGCAATACCAATGCCCCCACCATCATGATCGCGGAAAAGGCCGCCGACATGATACTGGGCCGTGCGCCCTTGCCGCCCGAAAGCGTGAAGGTCGCCGAAGACGGCCCGCAGCGTTTCGCCGCCGCACAGGCCGCCCTTTAG
PROTEIN sequence
Length: 560
MAVATMQTYDYIIIGAGSAGCVLANRLSADSKAQVLLIEAGGRDKSLMIHMPAGIPALLGKPNPYNWYYETEGQLNLNNRRLYWPRGKGWGGSSSINGMIYIRGHARDYDRWRQMGCEGWSFADVLPYFKRAESNENGGDDFHGAGGPLHVSNGRSANPLFRAFVRAGVEAGHAATRDFNGFAQEGFGPYQFTIHDGKRWSAATAYLKPILERPNLTIESHAQVSRIIFEGERAAGVEFVQKKEVVHVRAAREVILCGGAVNTPQVLMLSGIGPAETLNRFGIDVVADLDGVGQNLQDHLDCSIQYECTQPITLYSQSNPLNAAKTGLQYLLFGTGLATGQGLESGAFLKSRPDLETPDLQYHFIAALMYDHTRRRADRHGFMAHVCQLRPQSRGFISLKSADPLAPPLIQPNYLEAEEDRRALREGVKMAREIFAQKAFDPYRGPELMPGAQVRSDEDIDTFVRKTAETIYHPVGTARMGTGDGAVVDSRLRVYGVEGLRVVDASVMPSLVSGNTNAPTIMIAEKAADMILGRAPLPPESVKVAEDGPQRFAAAQAAL*