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scnpilot_solids2_trim150_scaffold_1372_curated

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1372_curated_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..221)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U2U6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP61561.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1372_curated_2
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

378..1895
DNA (1518bp) protein (506aa)
Putative ATPase n=1 Tax=Caulobacter sp. AP07 RepID=J3A2H3_9CAUL
Putative ATPase {ECO:0000313|EMBL:EJL25756.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein; K06915
scnpilot_solids2_trim150_scaffold_1372_curated_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1898..2977)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTK8_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63241.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_1372_curated_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3042..4097
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IB32_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF80780.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
AraC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1372_curated_5
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4110..6821)
DNA (2712bp) protein (904aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275, ECO:0000313|EMBL:CDO59542.1}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275, ECO:0000313|EMBL:CDO59542.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3]
aconitate hydratase n=1 Tax=Woodsholea maritima RepID=UPI0003793FDA
scnpilot_solids2_trim150_scaffold_1372_curated_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6897..7694
DNA (798bp) protein (266aa)
enoyl-CoA hydratase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase/isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSZ0_PARL1
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAK44249.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
scnpilot_solids2_trim150_scaffold_1372_curated_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7819..8598
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REA5_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG76847.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids2_trim150_scaffold_1372_curated_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8605..8964)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0JYA1_CUPNH
Uncharacterized protein {ECO:0000313|EMBL:GAN75933.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1372_curated_9
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9002..9424)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RLD5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR24045.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein; K09705 hypothetical protein
scnpilot_solids2_trim150_scaffold_1372_curated_10
bacterium YEK0313, Bacteria

Not on your lists

9538..13047
DNA (3510bp) protein (1170aa)
gdhA; NAD-glutamate dehydrogenase (EC:1.4.1.2); K15371 glutamate dehydrogenase [EC:1.4.1.2]
NAD-glutamate dehydrogenase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUZ5_RHOCS
NAD-specific glutamate dehydrogenase {ECO:0000313|EMBL:CEJ10936.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_1372_curated_11
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13049..14377
DNA (1329bp) protein (443aa)
NAD-glutamate dehydrogenase; K15371 glutamate dehydrogenase [EC:1.4.1.2]
NAD-specific glutamate dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMV5_9RHIZ
Glutamate dehydrogenase {ECO:0000313|EMBL:KIF22874.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
scnpilot_solids2_trim150_scaffold_1372_curated_12
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14517..15365
DNA (849bp) protein (283aa)
glutathione S-transferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036CD27D
Glutathione S-transferase {ECO:0000313|EMBL:ETR76952.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
glutathione S-transferase; K11209 GST-like protein
scnpilot_solids2_trim150_scaffold_1372_curated_13
Marinobacter sp. ES-1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15369..15776)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. ES-1 RepID=U7GF85_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ERP95858.1}; TaxID=1396858 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. ES-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1372_curated_14
Marinobacter sp. ES-1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15955..16593)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363616E
Uncharacterized protein {ECO:0000313|EMBL:ERP95857.1}; TaxID=1396858 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. ES-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1372_curated_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16989..17600)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AT73_AZOBR
conserved hypothetical protein; putative transcriptional regulator, PadR-like family
Uncharacterized protein {ECO:0000313|EMBL:CCD00634.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
scnpilot_solids2_trim150_scaffold_1372_curated_16
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17790..18572)
DNA (783bp) protein (261aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCB0_PHEZH
Short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:GAK44228.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
3-hydroxyacyl-CoA dehydrogenase
scnpilot_solids2_trim150_scaffold_1372_curated_17
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18781..19188)
DNA (408bp) protein (136aa)
Phenylacetic acid degradation-related protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCB5_PHEZH
phenylacetic acid degradation-related protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
scnpilot_solids2_trim150_scaffold_1372_curated_18
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19303..19689
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSX3_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63006.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_1372_curated_19
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19714..20106
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VML7_CAUST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG11740.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
scnpilot_solids2_trim150_scaffold_1372_curated_20
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20121..20753)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RII8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR25154.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
type IV pilus assembly PilZ
scnpilot_solids2_trim150_scaffold_1372_curated_21
unknown

Not on your lists

20979..21602
DNA (624bp) protein (208aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1372_curated_22
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21693..22127
DNA (435bp) protein (145aa)
TadE-like protein n=1 Tax=Caulobacter sp. AP07 RepID=J3ATX3_9CAUL
Mll7596 protein {ECO:0000313|EMBL:GAN00476.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
TadE-like protein
scnpilot_solids2_trim150_scaffold_1372_curated_23
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22127..23791
DNA (1665bp) protein (555aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BEB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48097.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_solids2_trim150_scaffold_1372_curated_24
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23883..25562
DNA (1680bp) protein (560aa)
choline dehydrogenase; K00108 choline dehydrogenase [EC:1.1.99.1]
Glucose-methanol-choline oxidoreductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWG9_PARL1
Choline dehydrogenase {ECO:0000313|EMBL:GAK46046.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
scnpilot_solids2_trim150_scaffold_1372_curated_25
unknown

Not on your lists

25630..25989
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1372_curated_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26146..26703
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07HP9_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ08535.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
scnpilot_solids2_trim150_scaffold_1372_curated_27
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26706..27005
DNA (300bp) protein (100aa)
UPI0003CFC5F5 related cluster n=1 Tax=unknown RepID=UPI0003CFC5F5
Transcriptional regulator {ECO:0000313|EMBL:ESZ17877.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1372_curated_28
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27015..27605
DNA (591bp) protein (197aa)
Putative intracellular septation protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRZ8_PARL1
putative intracellular septation protein
Putative intracellular septation protein {ECO:0000313|EMBL:ABS62681.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_1372_curated_29
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27591..28346)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039F3C42
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJN04851.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
scnpilot_solids2_trim150_scaffold_1372_curated_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28596..29300)
DNA (705bp) protein (235aa)
Rhomboid family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUB7_PARL1
rhomboid family protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Displaying items 1-30 of 32 in total

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