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scnpilot_solids2_trim150_scaffold_1372_curated_30

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(28596..29300)

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUB7_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 251.0
  • Bit_score: 250
  • Evalue 2.20e-63
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 251.0
  • Bit_score: 250
  • Evalue 6.80e-64
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 231.0
  • Bit_score: 263
  • Evalue 2.60e-67

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Taxonomy

R_Gamma2_60_33 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGATCCCGATCTCGGACGACAATCCCGTACGTATCACGCCCTATATCACTTGGGCGATCATCGCGCTGTGCGTGGCTGTTTTCCTGTGGGAGCTTTCGCTCGGGCCGCATATGGCGGCGGCGAGTTATATCTTCGGCTTTGTTCCGGCAACCTTGTTCGCGGGTGTGAAAAGTCCGTCTGCCGCACTCGGCATTCCAGGCTCGGTAACCCTGTTTACTTCGATGTTTCTGCATGGCGGCTTCATGCATATCGCCGGCAACATGCTTTATCTCTGGATTTTCGGGAACAATGTGGAAGAGGCGATGGGCCACTTCCGCTATCTGCTGTTTTATCTCGCCAGCGGTCTGGCCGCAGCCTTTACCATGGCATTGATGGATCCGCTTTCCACCGTGCCGATGATCGGCGCGTCGGGCGCGATCTCCGGTGTGCTGGGCGGCTATGTCCTGCTTTATCCGCGCGCGCGCGTCACGGCCATCGTGCCGCTCGGCATCCTGTTTTATCCCCTGAGAATTAGCGCGATCTGGGTTGTCGGCTTGTGGTTTTTGCTGCAATTGCTGAATGCGGTCTTGAGCGATCCCAATCAGCCCGGCGTTGCATGGTGGGCTCATGTCGGGGGCTTTGCGATGGGGCTGTTGCTGACCCCGTTCTTCAAGACCGCGCAATATCGCCTGTTCGGCGATGTCCGCCGCGGGCCCTGGGGGTGA
PROTEIN sequence
Length: 235
MIPISDDNPVRITPYITWAIIALCVAVFLWELSLGPHMAAASYIFGFVPATLFAGVKSPSAALGIPGSVTLFTSMFLHGGFMHIAGNMLYLWIFGNNVEEAMGHFRYLLFYLASGLAAAFTMALMDPLSTVPMIGASGAISGVLGGYVLLYPRARVTAIVPLGILFYPLRISAIWVVGLWFLLQLLNAVLSDPNQPGVAWWAHVGGFAMGLLLTPFFKTAQYRLFGDVRRGPWG*