ggKbase home page

scnpilot_solids2_trim150_scaffold_1392_curated_7

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 7697..8074

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Ponticaulis koreensis RepID=UPI0003B4AD58 similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 122.0
  • Bit_score: 213
  • Evalue 1.20e-52
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 122.0
  • Bit_score: 218
  • Evalue 4.00e-54
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 122.0
  • Bit_score: 210
  • Evalue 4.20e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Scytonema millei → Scytonema → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGGCGCGTATCGCAGGCGTCAATATTCCAACTCAGAAGCGCGTGGAAGTCGCGCTGCGCTATATCCATGGAATCGGTCCGGCCAAGGCGAAGGAAATCTGCGCCAAGGTGGGGATTTCCGATAACCGCCGCGTCTCGGAATTGAGTGATGCGGAAGTGATCCAGATTCGCGAGACCATCGACCGGGATTATCTGGTCGAAGGCGATCTCCGCCGCGAAGTGGCGATGAACATCAAGCGGCTGATGGACCTCGGGTCCTATCGCGGCCTGCGCCATCGCAAGAGCCTGCCCGTCCGCGGTCAGCGGACCCACACCAACGCGCGCACGCGCAAAGGCCCGGCGAAGGCGATTGCCGGCAAGAAGAAAGTGACGAAGTAA
PROTEIN sequence
Length: 126
VARIAGVNIPTQKRVEVALRYIHGIGPAKAKEICAKVGISDNRRVSELSDAEVIQIRETIDRDYLVEGDLRREVAMNIKRLMDLGSYRGLRHRKSLPVRGQRTHTNARTRKGPAKAIAGKKKVTK*