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scnpilot_solids2_trim150_scaffold_1392_curated_9

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 8564..9580

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 338.0
  • Bit_score: 563
  • Evalue 1.80e-157
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 338.0
  • Bit_score: 562
  • Evalue 8.90e-158
DNA-directed RNA polymerase subunit alpha n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RPOA_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 338.0
  • Bit_score: 563
  • Evalue 1.30e-157

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGTTTCAGAAAAACTGGCAGGAACTGATCAAGCCGCAAAAGCTGAAGATCGATGGCGGGCACGACGCCAGCCGTTCGGCCACCATTGTCGCCGAGCCGCTGGAGCGTGGCTTCGGCCTCACCCTCGGCAATGCGCTGCGCCGCGTGCTGCTGTCGTCGCTGCAGGGCGCTGCCGTCACCTCGATCCAGATCGAGGGCGTGCTGCATGAATTCTCCTCCATCACGGGCGTGCGCGAAGACGTCACCGACATCGTGCTCAACGTGAAGCAGATCGCGCTTCGCATGCACTCCGAAGGGCCGAAGCGGCTGTCGCTCCGTGTCGAAGGGCCGGGCGAAGTCACCGCGGGCAAGATCGCGGCCATGGCCGATGTCGATATCCTCAATCCCGACCTCGTGCTCTGCACGCTGGACGAGAAAGTGGATTTCCGCATGGAACTGGCGGTCGCAACCGGCAAGGGTTATGTCCCGGCCGACCGCAACCGCCCGGAAGATGCGCCCATTGGGCTGATCCCGGTCGACTCGCTGTTCAGCCCGGTGAAGAAGGTCAGCTACAAGGTTGAGAACACCCGCGAGGGCCAGATTCTCGATTACGACAAGCTGACCCTGACGGTTGAGACCAATGGCGCCGTCACGCCGGACAATGCGGTGGCCTATGCCGCGCGCATCCTGCAGGACCAGCTTCAGGTCTTCATCAATTTCGAAGAGCCGCGGGAGCGTGTGGCGGAAGAGGCGAAGCCCGATCTCGCCTTCAACCCGGTGCTGCTCAAGAAGGTGGACGAACTCGAACTTTCCGTCCGTTCGGCCAACTGCCTGAAGAACGACAACATCGTCTATATCGGCGACCTCATTCAGAAGACGGAAGCCGAAATGCTCCGTACACCGAATTTCGGCCGCAAGTCGCTGAACGAGATCAAGGCGGTGCTGGCGGAAATGGGCTTGCATCTGGGCATGGAAGTGCCGGGCTGGCCGCCGGAGAATATCGAAGACTTGGCCAAACGGTACGAGGATCAGTATTAA
PROTEIN sequence
Length: 339
MFQKNWQELIKPQKLKIDGGHDASRSATIVAEPLERGFGLTLGNALRRVLLSSLQGAAVTSIQIEGVLHEFSSITGVREDVTDIVLNVKQIALRMHSEGPKRLSLRVEGPGEVTAGKIAAMADVDILNPDLVLCTLDEKVDFRMELAVATGKGYVPADRNRPEDAPIGLIPVDSLFSPVKKVSYKVENTREGQILDYDKLTLTVETNGAVTPDNAVAYAARILQDQLQVFINFEEPRERVAEEAKPDLAFNPVLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKAVLAEMGLHLGMEVPGWPPENIEDLAKRYEDQY*