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scnpilot_solids2_trim150_scaffold_2142_curated_18

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 13418..14131

Top 3 Functional Annotations

Value Algorithm Source
rph; ribonuclease PH; K00989 ribonuclease PH [EC:2.7.7.56] similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 237.0
  • Bit_score: 348
  • Evalue 1.40e-93
Ribonuclease PH {ECO:0000255|HAMAP-Rule:MF_00564}; Short=RNase PH {ECO:0000255|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000255|HAMAP-Rule:MF_00564};; tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_00564}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 237.0
  • Bit_score: 348
  • Evalue 6.30e-93
Ribonuclease PH n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RNPH_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 237.0
  • Bit_score: 348
  • Evalue 4.50e-93

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCGCCCCAGCAAACGCGCGAAAGACCAGATGCGTGAGATCAGCCTCGAACCCGGCGTGTCGCGCTACGCCGAAGGCTCCTGCCTGGTGAAATTCGGCCATACCCATGTGCTGGTCACCGCCAGCCTGCAGGAACAGGCCCCGCCCTTCCTCAAAGGCAGCGGCAAGGGCTGGGTAACGGCGGAATATGGCATGCTGCCCCGTTCCACCCATGACCGCATGCGGCGCGAAGCGGCGCAGGGCAAGCAGTCCGGCCGCACCCAGGAGATTCAGCGCCTGATCGGCCGCTCCTTACGGGCGGTGACGGATTTGGCTGCGCTGGGCGAACGCCAGATCGCGATCGATTGCGACGTGCTGCAGGCCGATGGCGGCACCCGCACCGCCTCCATCACCGGTGGTTTCGTCGCGCTGGCGCAGTGCGCGGCCTTCATGAAGAAGACCGGCATGATCACAAAGCCCGTGATTCTGGATCAGGTGGCGGCGGTGTCGTGTGGCATCTGGCAGGGCGAAGCGGTGCTCGACCTCGATTACGACGAGGATTCGCACGCCGGGACCGATGCCAATTTCGTCATCACCGGCAAAGGCGGGCTGGTGGAGATTCAGGGCACCGCGGAAGGCGAGCCCTTCAGCGACGAACAATTCACCGAATTGCTGCGGCTGGCGCGCAAGGGCGTGGGCGCGCTGGTGGATCTGCAGAAAAAGGCGCTGGCGTGA
PROTEIN sequence
Length: 238
MRPSKRAKDQMREISLEPGVSRYAEGSCLVKFGHTHVLVTASLQEQAPPFLKGSGKGWVTAEYGMLPRSTHDRMRREAAQGKQSGRTQEIQRLIGRSLRAVTDLAALGERQIAIDCDVLQADGGTRTASITGGFVALAQCAAFMKKTGMITKPVILDQVAAVSCGIWQGEAVLDLDYDEDSHAGTDANFVITGKGGLVEIQGTAEGEPFSDEQFTELLRLARKGVGALVDLQKKALA*