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scnpilot_solids2_trim150_scaffold_915_curated_22

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(17898..19073)

Top 3 Functional Annotations

Value Algorithm Source
ldc; lysine (EC:4.1.1.17 4.1.1.18); K01581 ornithine decarboxylase [EC:4.1.1.17] similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 375.0
  • Bit_score: 335
  • Evalue 2.70e-89
Lysine {ECO:0000313|EMBL:ACI98761.1}; EC=4.1.1.17 {ECO:0000313|EMBL:ACI98761.1};; EC=4.1.1.18 {ECO:0000313|EMBL:ACI98761.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 375.0
  • Bit_score: 335
  • Evalue 1.20e-88
Lysine n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMU5_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 375.0
  • Bit_score: 335
  • Evalue 8.50e-89

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Taxonomy

Rhodospirillum centenum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGAACGTGCGCCCCGCCAACCTTGTGGAACTTCCCCGCTTCACCTCGATCGAACAATTGATCGAGAAAACGCGGCCGGTGGAACCCGTCTACGTGCTGCACCCCGCCCGCTTCAAAGAGGCGGCGAAGCGCTTTCTCGACACCTTTCCGGGCGACACGCTGTACGCGGTGAAGGCCAACCCCCACCCCCATGTGCTGGATCAGGTGTGGGCGGCGGGCATCCGCCATTTCGACACCGCCTCGCTGGCCGAGATCGAACTGGTGCGGGGGCGTTTTCCCGAAGCCAAATGCCATTTCATGGCGCCGGTGCGCCTTCCCGGCGCGGCCAAAGCAGCGTTCGAGAAACATGGCGTGCACGACTTCGTGGTCGATTGCGACGACATGCTGGAATCCCTGCTGGCGGAAACCGGCGGCGGGCCCAGTTTGCGCGTCTTCGTGCGCATCGCCACCCCACTGGGCGGCGCGGTGCTGGAGCTTTCGAGCAAGTTCGGCACCACGCCGGACGATGCGGCGCGGCTTCTGAAGCGGGTGGTGGAGGCCGGCGCTCAGCCGGCGCTGACCTTCCATGTCGGTTCCCAATGCCTGTCGCCCTTTTCCTATGCCCAGGCGGTGGAAATGGCGCGGCGCACGGCGGCCCAGGCCGGTGTGGAGATCGCAGCGCTGGACATCGGCGGCGGCTTTCCCGGCCCCTATCCCGGCAACGACGTGCCGCCCTATCACTGGTATTTCGACACCATCCGCGAGGCGCTGGACACCCTGCCGGGCAAGGACCGGCTGACTGTGATGTGCGAACCGGGGCGCGCGCTGATCGCCGAAGGCATGTCGCTCGTCACGCTCGCGACGCTGCGCAAGGACCACAGCCTGTACATCAATGACGGGGTTTACGGCAGTTTCGACGAGCTGACCCTGCCGGGCTGGACCGCCGATTACGCGATGCGGCCCCTGACCGTGGACAAACGCGGCCGGGTGCGGCCACGGTTGGGCACGCTGAACGCCTTCCGTGTCTACGGCCCGACCTGCGACACGCTGGACGTGCTGCCGCGCCCGCTGATGCTGCCCGATACCATTGTCGCGGGCGATTACATCGTGTTCCACGACATCGGCGCCTATTCGGTGGCGGTGAGGACCGATTTCAACGGCTTCTTCCCCGACCGCTGGGCGATTGCGGGAAAATAG
PROTEIN sequence
Length: 392
MNVRPANLVELPRFTSIEQLIEKTRPVEPVYVLHPARFKEAAKRFLDTFPGDTLYAVKANPHPHVLDQVWAAGIRHFDTASLAEIELVRGRFPEAKCHFMAPVRLPGAAKAAFEKHGVHDFVVDCDDMLESLLAETGGGPSLRVFVRIATPLGGAVLELSSKFGTTPDDAARLLKRVVEAGAQPALTFHVGSQCLSPFSYAQAVEMARRTAAQAGVEIAALDIGGGFPGPYPGNDVPPYHWYFDTIREALDTLPGKDRLTVMCEPGRALIAEGMSLVTLATLRKDHSLYINDGVYGSFDELTLPGWTADYAMRPLTVDKRGRVRPRLGTLNAFRVYGPTCDTLDVLPRPLMLPDTIVAGDYIVFHDIGAYSVAVRTDFNGFFPDRWAIAGK*