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scnpilot_solids2_trim150_scaffold_419_curated_5

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 2146..2856

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003715452 similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 220.0
  • Bit_score: 241
  • Evalue 1.00e-60
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO40152.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 226.0
  • Bit_score: 262
  • Evalue 4.60e-67
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 220.0
  • Bit_score: 236
  • Evalue 7.80e-60

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGCCTATGCAGGCGCTGCGGGACTACGAAAATCTGACGGACGTCGAACTGGCGGCCTGTTTTGCCCGAAAGGAGCCGCAAGCGGTCCGCCTCGTCACGCAACGCAACAATCAGCGGCTGTTCCGTGCCGCGTGGAGCGTCACGCGCAACCGTGCAGAGGCCGAGGATGTCGTGCAGGAAGCCTATCTCCACGCCATTCCAGCGGCTGCTTCCTTCAACGGAAAATCTTCGCTCACAACCTGGCTGACCCGGATCGCGGTCAACGAAGCATTGTCGCGCAGGCGTGCCGCGTTACGGCGTATGGCGGCATTCAACACGGATTCGGTCGTGGTGATGGATGAATATCGCGAGAAACTGATGAACGCCACGGCAGGCAAGGCAACACCGGAGGCCGCATTGGCCCGCAAACAATTGGCCGGTGTGCTGGAACGCGCCATCGCGCGCCTGCCGGAACCGTTCCGCCTCGTTTTCGTGTTGCGTGAGATCGAAGGCCTCAGTGTCGATGAAACCGCAGGCGTGCTCGGCATCAATCCCGACACGGTGAAAACCCGCGCGGTGCGTGCGCGCCACCGCCTGCAACAGATGCTTGACCCCGAATGGAAAGCGGCATTGGCCGAAACTTTCCCGTTCGCGGGGGTGGACTGCGAAGCCCTGACAGCACGCGTCCTTGAACGTCTGGGCCATTCCGGCCCGGAAAACACCGGAGAATAA
PROTEIN sequence
Length: 237
MPMQALRDYENLTDVELAACFARKEPQAVRLVTQRNNQRLFRAAWSVTRNRAEAEDVVQEAYLHAIPAAASFNGKSSLTTWLTRIAVNEALSRRRAALRRMAAFNTDSVVVMDEYREKLMNATAGKATPEAALARKQLAGVLERAIARLPEPFRLVFVLREIEGLSVDETAGVLGINPDTVKTRAVRARHRLQQMLDPEWKAALAETFPFAGVDCEALTARVLERLGHSGPENTGE*