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scnpilot_solids2_trim150_scaffold_2451_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2451_curated_1
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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473..799
DNA (327bp) protein (109aa)
Putative transcriptional regulator n=1 Tax=Flavobacterium sp. CF136 RepID=J3BVX6_9FLAO
HTH-type transcriptional repressor CzrA {ECO:0000313|EMBL:CEJ72009.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2451_curated_2
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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829..1668
DNA (840bp) protein (280aa)
Arsenite S-adenosylmethyltransferase n=1 Tax=Imtechella halotolerans K1 RepID=I0W5J9_9FLAO
Arsenite S-adenosylmethyltransferase {ECO:0000313|EMBL:EID71665.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
methylase involved in ubiquinone/menaquinone biosynthesis
scnpilot_solids2_trim150_scaffold_2451_curated_3

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1619..2092
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VL75_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL18139.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
OsmC family protein
scnpilot_solids2_trim150_scaffold_2451_curated_4
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2094..3116
DNA (1023bp) protein (341aa)
Arsenical-resistance protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0E4_9FLAO
Arsenic resistance protein ArsB {ECO:0000313|EMBL:KEQ31080.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
scnpilot_solids2_trim150_scaffold_2451_curated_5
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3113..3529
DNA (417bp) protein (139aa)
protein tyrosine phosphatase (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1]
Protein tyrosine phosphatase {ECO:0000313|EMBL:ADY51162.1}; EC=1.20.4.1 {ECO:0000313|EMBL:ADY51162.1};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Protein tyrosine phosphatase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7D7_PEDSD
scnpilot_solids2_trim150_scaffold_2451_curated_6
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4143..4973
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00035F4E7C
AraC family transcriptional regulator {ECO:0000313|EMBL:KGO84596.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
helix-turn-helix domain-containing protein
scnpilot_solids2_trim150_scaffold_2451_curated_7
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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5071..5613
DNA (543bp) protein (181aa)
YceI family protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7F7_PEDSD
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_9
scnpilot_solids2_trim150_scaffold_2451_curated_8
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5761..6759
DNA (999bp) protein (333aa)
GTP pyrophosphokinase domain protein n=1 Tax=Formosa sp. AK20 RepID=M7MCD9_9FLAO
GTP pyrophosphokinase domain protein {ECO:0000313|EMBL:EMQ93817.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
putative dithiol-disulfide isomerase involved in polyketide biosynthesis
scnpilot_solids2_trim150_scaffold_2451_curated_9
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6763..7185
DNA (423bp) protein (141aa)
DoxX family protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EGB3_9FLAO
DoxX family protein {ECO:0000313|EMBL:KJJ38971.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
DoxX family protein; K15977 putative oxidoreductase
scnpilot_solids2_trim150_scaffold_2451_curated_10
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7193..7762
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S581_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52026.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_2451_curated_11
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7759..8640
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C1V5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ37598.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2451_curated_12
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8644..9276
DNA (633bp) protein (211aa)
Putative membrane protein n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AMS5_FLELS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFM05260.1}; Flags: Precursor;; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
Displaying 12 items

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