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scnpilot_solids2_trim150_scaffold_727_curated

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_727_curated_1
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1..948)
DNA (948bp) protein (316aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GSP5_9BACT
scnpilot_solids2_trim150_scaffold_727_curated_2
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1095..1817)
DNA (723bp) protein (241aa)
Phosphoglycerol geranylgeranyltransferase id=3378243 bin=GWF2_Bacteroidetes_35_48 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Geranylgeranylglyceryl phosphate synthase
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_727_curated_3
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(1824..2354)
DNA (531bp) protein (177aa)
Putative uncharacterized protein id=4310932 bin=GWF2_Bacteroidetes_40_13 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_727_curated_4
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2408..2800)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037F603E
histidine triad (hit) protein; K02503 Hit-like protein involved in cell-cycle regulation
Tax=RBG_13_Bacteroidetes_42_15_curated
scnpilot_solids2_trim150_scaffold_727_curated_5
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2809..5463)
DNA (2655bp) protein (885aa)
Adhesin AidA-related {ECO:0000313|EMBL:CCH51821.1}; EC=3.2.1.- {ECO:0000313|EMBL:CCH51821.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Adhesin AidA-related n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GD47_9BACT
hypothetical protein
scnpilot_solids2_trim150_scaffold_727_curated_6
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5571..7985)
DNA (2415bp) protein (805aa)
Transketolase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUA4_CHIPD
Transketolase {ECO:0000313|EMBL:KGE86900.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
transketolase
scnpilot_solids2_trim150_scaffold_727_curated_7
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8031..8759)
DNA (729bp) protein (243aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR id=2017290 bin=GWD2_Bacteroidetes_33_33 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_727_curated_8
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8971..9537)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002E2FA07
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK02543.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_727_curated_9
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9781..10299)
DNA (519bp) protein (173aa)
rod shape-determining protein mred id=2141432 bin=GWD2_Bacteroidetes_33_33 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
rod shape-determining protein MreD
Tax=GWA2_Bacteroidetes_31_9b_curated
scnpilot_solids2_trim150_scaffold_727_curated_10
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10302..11147)
DNA (846bp) protein (282aa)
rod shape-determining protein MreC id=4630408 bin=GWF2_Bacteroidetes_33_38 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
cell shape-determining protein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_727_curated_11
Bacteroides sp. CAG:545, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11334..12305
DNA (972bp) protein (324aa)
UPF0365 protein BN702_00057 n=1 Tax=Bacteroides sp. CAG:545 RepID=R5S2I0_9BACE
UPF0365 protein BN702_00057 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=1262742 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:545.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_727_curated_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12300..13136)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THS1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98516.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_727_curated_13
unknown

Not on your lists

comp(13120..13662)
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_727_curated_14
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13665..14651)
DNA (987bp) protein (329aa)
Putative acyl protein synthase/acyl-CoA reductase-like protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PLK4_MURRD
putative acyl protein synthase/acyl-CoA reductase-like protein
Putative acyl protein synthase/acyl-CoA reductase-like protein {ECO:0000313|EMBL:AEM70036.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
scnpilot_solids2_trim150_scaffold_727_curated_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14657..15502)
DNA (846bp) protein (282aa)
Transcription factor jumonji jmjC domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4N0_DYAFD
transcription factor jumonji jmjC domain-containing protein
Transcription factor jumonji jmjC domain protein {ECO:0000313|EMBL:ACT95854.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_727_curated_16
R_OP11_Levybacteria_40_58, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(15688..16395)
DNA (708bp) protein (236aa)
Putative glycosyltransferase n=1 Tax=Clostridium sp. CAG:632 RepID=R5JU15_9CLOT
family 2 glycosyl transferase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_58_curated
scnpilot_solids2_trim150_scaffold_727_curated_17
Leptospira meyeri, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16487..17875
DNA (1389bp) protein (463aa)
FAD binding domain protein n=2 Tax=Leptospira meyeri RepID=K5CEL0_LEPME
FAD binding domain protein {ECO:0000313|EMBL:EKJ88186.1}; TaxID=1193051 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira meyeri serovar Hardjo str. Went 5.;"
FAD/FMN-containing dehydrogenase
scnpilot_solids2_trim150_scaffold_727_curated_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17988..19922
DNA (1935bp) protein (645aa)
methylmalonyl-CoA mutase; K11942 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ACU58566.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACU58566.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Methylmalonyl-CoA mutase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMM2_CHIPD
scnpilot_solids2_trim150_scaffold_727_curated_19
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19932..21248)
DNA (1317bp) protein (439aa)
hypothetical protein id=4087096 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_727_curated_20
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21293..21979)
DNA (687bp) protein (229aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Pedobacter agri RepID=UPI00029AB4A5
putative methyltransferase
scnpilot_solids2_trim150_scaffold_727_curated_21
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22022..23311)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI00037BC834
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ADQ79470.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_solids2_trim150_scaffold_727_curated_22
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(23326..25776)
DNA (2451bp) protein (817aa)
Putative uncharacterized protein id=2003509 bin=GWD2_Bacteroidetes_33_33 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids2_trim150_scaffold_727_curated_23
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25969..26472
DNA (504bp) protein (168aa)
slyD; peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00036FFE7A
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_solids2_trim150_scaffold_727_curated_24
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26568..27308)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11V42_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG58724.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
Displaying 24 items

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