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scnpilot_solids2_trim150_scaffold_333_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_333_curated_1
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(344..793)
DNA (450bp) protein (150aa)
hydrolase n=1 Tax=Capnocytophaga sputigena RepID=UPI000185C9BD
Cell wall-associated hydrolase
Tax=CG_Maritim_01
scnpilot_solids2_trim150_scaffold_333_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1247..1609
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIF5_NIAKG
hypothetical protein; K06929
Uncharacterized protein {ECO:0000313|EMBL:AEW01771.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_333_curated_3
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

1638..3761
DNA (2124bp) protein (708aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJP8_FLUTR
PKD domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_333_curated_4
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3915..8039
DNA (4125bp) protein (1375aa)
Putative uncharacterized protein id=4523886 bin=GWF2_Bacteroidetes_38_335 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_333_curated_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8065..10206
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLT5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU62149.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_333_curated_6
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10214..11575
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000380DF3D
Uncharacterized protein {ECO:0000313|EMBL:KJS05949.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Pregnancy-associated plasma protein-A
scnpilot_solids2_trim150_scaffold_333_curated_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11620..12846
DNA (1227bp) protein (409aa)
Ornithine--oxo-acid aminotransferase {ECO:0000313|EMBL:KIC91966.1}; EC=2.6.1.13 {ECO:0000313|EMBL:KIC91966.1};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ornithine aminotransferase n=1 Tax=Segetibacter koreensis RepID=UPI00037C8ACD
ornithine aminotransferase
scnpilot_solids2_trim150_scaffold_333_curated_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12920..13840
DNA (921bp) protein (307aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Methionyl-tRNA formyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKX9_CHIPD
scnpilot_solids2_trim150_scaffold_333_curated_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13879..15273
DNA (1395bp) protein (465aa)
methylmalonyl-CoA mutase; K11942 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ACU58566.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACU58566.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003719872
scnpilot_solids2_trim150_scaffold_333_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15277..16299
DNA (1023bp) protein (341aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
2-oxoacid ferredoxin oxidoreductase subunit beta n=1 Tax=Niabella aurantiaca RepID=UPI00037FF26C
2-oxoacid ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:AHF16437.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids2_trim150_scaffold_333_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16391..18379
DNA (1989bp) protein (663aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB05_NIAKG
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEW01352.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_333_curated_12
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(18718..19896)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI00036DF540
acetyl-CoA acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_333_curated_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19931..20776)
DNA (846bp) protein (282aa)
acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAC2_CHIPD
scnpilot_solids2_trim150_scaffold_333_curated_14
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20810..21871)
DNA (1062bp) protein (354aa)
DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R8S5_OWEHD
DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme {ECO:0000313|EMBL:AEV32505.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_333_curated_15
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22149..22673)
DNA (525bp) protein (175aa)
Flavodoxin n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4ANU5_FLELS
flavodoxin, long chain
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
scnpilot_solids2_trim150_scaffold_333_curated_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22718..24085
DNA (1368bp) protein (456aa)
Fmu (Sun) domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0C8_PALPW
fmu (sun) domain protein
Fmu (Sun) domain protein {ECO:0000313|EMBL:ADQ78287.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_solids2_trim150_scaffold_333_curated_17
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24158..26791)
DNA (2634bp) protein (878aa)
ATPase AAA-2 n=1 Tax=Pedobacter sp. BAL39 RepID=A6EH00_9SPHI
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
scnpilot_solids2_trim150_scaffold_333_curated_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26948..28087)
DNA (1140bp) protein (380aa)
Butyryl-CoA dehydrogenase (EC:1.3.99.2)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEA44531.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEA44531.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Butyryl-CoA dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEJ2_FLUTR
scnpilot_solids2_trim150_scaffold_333_curated_19
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28248..30875
DNA (2628bp) protein (876aa)
DNA mismatch repair protein MutS id=4439627 bin=GWF2_Bacteroidetes_35_48 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_333_curated_20
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30877..31731)
DNA (855bp) protein (285aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AIA6_FLELS
hypothetical protein
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:AFM03691.1}; Flags: Precursor;; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
scnpilot_solids2_trim150_scaffold_333_curated_21
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31781..33481)
DNA (1701bp) protein (567aa)
Glycerol-3-phosphate 1-O-acyltransferase {ECO:0000256|SAAS:SAAS00182414}; EC=2.3.1.15 {ECO:0000256|SAAS:SAAS00182414};; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
glycerol-3-phosphate O-acyltransferase (EC:2.3.1.15)
Glycerol-3-phosphate acyltransferase n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XS29_9BACT
scnpilot_solids2_trim150_scaffold_333_curated_22
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33514..34182)
DNA (669bp) protein (223aa)
Ferredoxin reductase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SHG0_9FLAO
Ferredoxin reductase {ECO:0000313|EMBL:ESU25894.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
flavodoxin reductase family protein
scnpilot_solids2_trim150_scaffold_333_curated_23
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34205..34900)
DNA (696bp) protein (232aa)
HAD hydrolase, subfamily IA id=4245537 bin=GWF2_Bacteroidetes_38_335 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
HAD hydrolase, subfamily IA; K07025 putative hydrolase of the HAD superfamily
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids2_trim150_scaffold_333_curated_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34998..36692
DNA (1695bp) protein (565aa)
Na+/solute symporter n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUZ8_CHIPD
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ACU62907.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_333_curated_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(36724..37218)
DNA (495bp) protein (165aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_333_curated_26
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37239..37979
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003170217
Ligand-binding protein SH3 {ECO:0000313|EMBL:KGD69473.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
NarL family response regulator
scnpilot_solids2_trim150_scaffold_333_curated_27
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

38258..40633
DNA (2376bp) protein (792aa)
Virion structural protein n=1 Tax=Cyanophage S-TIM5 RepID=H6WFW1_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KIF31083.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_333_curated_28
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

41246..42241
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002D84814
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_333_curated_29
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

42400..43596
DNA (1197bp) protein (399aa)
Enterobactin exporter EntS n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7P2B1_9BACT
major facilitator superfamily permease
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_333_curated_30
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43689..44921)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNG2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17524.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
Displaying items 1-30 of 34 in total

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