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scnpilot_solids2_trim150_scaffold_970_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_970_curated_1
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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comp(3..635)
DNA (633bp) protein (211aa)
orn/dap/arg decarboxylase 2; K01585 arginine decarboxylase [EC:4.1.1.19]
Putative uncharacterized protein id=4317333 bin=GWF2_Bacteroidetes_41_61 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_solids2_trim150_scaffold_970_curated_2
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

733..1572
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI00037EB227
Uncharacterized protein {ECO:0000313|EMBL:KIY14093.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
family 2 glycosyl transferase
scnpilot_solids2_trim150_scaffold_970_curated_3
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1892..2311
DNA (420bp) protein (140aa)
Type II adenine specific methyltransferase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2K5_9PLAN
Type II adenine specific methyltransferase {ECO:0000313|EMBL:EDL60864.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_970_curated_4
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2591..3151
DNA (561bp) protein (187aa)
type II adenine specific methyltransferase; K00571 site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
Ribosomal protein L11 methyltransferase-like protein n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NI17_9PAST
Uncharacterized protein {ECO:0000313|EMBL:KFJ93327.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
scnpilot_solids2_trim150_scaffold_970_curated_5
RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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3148..3897
DNA (750bp) protein (250aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated
scnpilot_solids2_trim150_scaffold_970_curated_6
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

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3900..4418
DNA (519bp) protein (173aa)
AseI n=1 Tax=Aquaspirillum serpens RepID=E3VXA5_AQUSE
hypothetical protein
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
scnpilot_solids2_trim150_scaffold_970_curated_7
unknown

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comp(4569..5147)
DNA (579bp) protein (193aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_970_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5199..6053)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000379EEBD
putative carboxyphosphonoenolpyruvate phosphonomutase protein
Putative carboxyphosphonoenolpyruvate phosphonomutase protein {ECO:0000313|EMBL:ACT94312.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_970_curated_9
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6206..6565
DNA (360bp) protein (120aa)
Putative membrane protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1L018_9BACT
Putative membrane protein {ECO:0000313|EMBL:EKB49710.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_970_curated_10
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6572..6862)
DNA (291bp) protein (97aa)
Histone family protein DNA-binding protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZM8_HALH1
DNA-binding protein {ECO:0000313|EMBL:KGE88223.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
scnpilot_solids2_trim150_scaffold_970_curated_11
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6963..8036
DNA (1074bp) protein (358aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
A/G-specific DNA-adenine glycosylase {ECO:0000313|EMBL:AFL80845.1}; EC=3.2.2.- {ECO:0000313|EMBL:AFL80845.1};; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
A/G-specific DNA-adenine glycosylase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YV27_AEQSU
scnpilot_solids2_trim150_scaffold_970_curated_12
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8074..8511
DNA (438bp) protein (146aa)
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Single-stranded DNA-binding protein id=4377295 bin=GWF2_Bacteroidetes_49_14 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
single-stranded DNA-binding protein
scnpilot_solids2_trim150_scaffold_970_curated_13
uncultured Flavobacteriia bacterium, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8549..9928
DNA (1380bp) protein (460aa)
Gliding motility protein n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RG82_9BACT
Gliding motility protein {ECO:0000313|EMBL:CCG00043.1}; TaxID=212695 species="Bacteria; Bacteroidetes; Flavobacteriia; environmental samples.;" source="uncultured Flavobacteriia bacterium.;"
gliding motility-associated protein GldE
scnpilot_solids2_trim150_scaffold_970_curated_14
Mucispirillum schaedleri, Mucispirillum, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(9938..10726)
DNA (789bp) protein (263aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; TaxID=1379858 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Mucispirillum.;" source="Mucispirillum schaedleri ASF457.;"
2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
3-deoxy-8-phosphooctulonate synthase n=1 Tax=Mucispirillum schaedleri ASF457 RepID=V2Q487_9BACT
scnpilot_solids2_trim150_scaffold_970_curated_15
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10830..14378
DNA (3549bp) protein (1183aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS04846.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
PDK repeat-containing protein id=1825793 bin=GWE2_Bacteroidetes_42_42 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
PKD domain-containing protein
scnpilot_solids2_trim150_scaffold_970_curated_16
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

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14420..15547
DNA (1128bp) protein (376aa)
Putative uncharacterized protein id=1799853 bin=GWE2_Bacteroidetes_29_8 species=uncultured Cytophagia bacterium genus=unknown taxon_order=unknown taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_solids2_trim150_scaffold_970_curated_17
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

15578..17632
DNA (2055bp) protein (685aa)
OmpA/MotB domain protein id=3972981 bin=GWF2_Bacteroidetes_29_10 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_970_curated_18
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

17734..19242
DNA (1509bp) protein (503aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=3299401 bin=GWF2_Bacteroidetes_29_10 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
thiol-disulfide isomerase
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_solids2_trim150_scaffold_970_curated_19
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19346..19825
DNA (480bp) protein (160aa)
Response regulator receiver n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466R3_METBF
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AAZ72129.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
scnpilot_solids2_trim150_scaffold_970_curated_20
unknown

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comp(19822..20196)
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_970_curated_21
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(20217..21941)
DNA (1725bp) protein (575aa)
Collagen triple helix repeat-containing protein id=4991705 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Collagen triple helix repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_970_curated_22
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(21963..22238)
DNA (276bp) protein (92aa)
Uncharacterized conserved protein UCP016719 n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BUM4_9FLAO
Uncharacterized conserved protein UCP016719 {ECO:0000313|EMBL:EHQ01679.1}; Flags: Precursor;; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
hypothetical protein
Displaying 22 items

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