ggKbase home page

scnpilot_solids2_trim150_scaffold_399_curated

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_399_curated_1
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

153..569
DNA (417bp) protein (139aa)
ATP synthase F1 subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R0U3_OWEHD
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_solids2_trim150_scaffold_399_curated_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

614..862
DNA (249bp) protein (83aa)
H+transporting two-sector ATPase aubunit delta/epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AB3E6
ATP synthase subunit epsilon {ECO:0000313|EMBL:GAO44968.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids2_trim150_scaffold_399_curated_3
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1041..4277
DNA (3237bp) protein (1079aa)
hypothetical protein AtheD1_04817 id=4241749 bin=GWF2_Bacteroidetes_33_38 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_399_curated_4
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4313..4762
DNA (450bp) protein (150aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJF43351.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
scnpilot_solids2_trim150_scaffold_399_curated_5
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4975..6498
DNA (1524bp) protein (508aa)
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VPG7_9SPHI
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
scnpilot_solids2_trim150_scaffold_399_curated_6
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6529..7872
DNA (1344bp) protein (448aa)
exonuclease; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036843F9
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:AKD05827.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
scnpilot_solids2_trim150_scaffold_399_curated_7
unknown

Not on your lists

8525..9004
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_399_curated_8
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9013..10548
DNA (1536bp) protein (512aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE87227.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
scnpilot_solids2_trim150_scaffold_399_curated_9
unknown

Not on your lists

10545..10652
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_399_curated_10
unknown

Not on your lists

10678..10947
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_399_curated_11
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11114..11284
DNA (171bp) protein (57aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Flavobacterium sp. CF136 RepID=J2J975_9FLAO
Cytochrome oxidase maturation protein Cbb3 {ECO:0000313|EMBL:KIX22760.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
cytochrome oxidase maturation protein, cbb3-type
scnpilot_solids2_trim150_scaffold_399_curated_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11291..13441
DNA (2151bp) protein (717aa)
Cytochrome c oxidase, cbb3-type, subunit I/cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTL9_SOLCM
cytochrome c oxidase, cbb3-type, subunit I/cytochrome c oxidase, cbb3-type, subunit II
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_399_curated_13
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13466..13633
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U1I3_9FLAO
hypothetical protein
Tax=CG_Flavo_02
scnpilot_solids2_trim150_scaffold_399_curated_14
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13665..14801
DNA (1137bp) protein (379aa)
Cytochrome c class I n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD67_NIAKG
cytochrome c class I; K00406 cytochrome c oxidase cbb3-type subunit III
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_399_curated_15
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14947..16353
DNA (1407bp) protein (469aa)
Cytochrome c oxidase accessory protein FixG n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTM2_SOLCM
cytochrome c oxidase accessory protein FixG
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_399_curated_16
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16382..16828
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NB47_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMR04421.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_399_curated_17
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

16829..17536
DNA (708bp) protein (236aa)
ial:IALB_0726 hypothetical protein; K09792 hypothetical protein id=718453 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein; K09792 hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_399_curated_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(17587..22737)
DNA (5151bp) protein (1717aa)
Putative uncharacterized protein id=3263629 bin=GWF2_Bacteroidetes_35_48 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_399_curated_19
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22742..23839)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D6B07
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_399_curated_20
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23843..24427)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2A959_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMB18626.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_399_curated_21
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24454..27438
DNA (2985bp) protein (995aa)
DNA polymerase I {ECO:0000313|EMBL:KHJ38337.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KHJ38337.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I n=1 Tax=Pedobacter arcticus RepID=UPI000303FB80
scnpilot_solids2_trim150_scaffold_399_curated_22
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27458..28495)
DNA (1038bp) protein (346aa)
Putative extracellular nuclease n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AHV2_FLELS
extracellular nuclease
Putative extracellular nuclease {ECO:0000313|EMBL:AFM03537.1}; Flags: Precursor;; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
scnpilot_solids2_trim150_scaffold_399_curated_23
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(28476..29369)
DNA (894bp) protein (298aa)
RmlD {ECO:0000313|EMBL:KEI67009.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KEI67009.1};; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126/8.;"
dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
dTDP-4-dehydrorhamnose reductase n=1 Tax=Cyanothece sp. (strain PCC 8802) RepID=C7QQ11_CYAP0
scnpilot_solids2_trim150_scaffold_399_curated_24
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

29513..30886
DNA (1374bp) protein (458aa)
Membrane protein, putative id=1907420 bin=GWE2_Bacteroidetes_29_8 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_solids2_trim150_scaffold_399_curated_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(30898..34311)
DNA (3414bp) protein (1138aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003638356
chromosome segregation ATPase-like protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_399_curated_26
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34554..35678
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B3F6A2
Uncharacterized protein {ECO:0000313|EMBL:KGO92609.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
acyltransferase
scnpilot_solids2_trim150_scaffold_399_curated_27
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35756..38203
DNA (2448bp) protein (816aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
ATP-dependent protease La; K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=1 Tax=Segetibacter koreensis RepID=UPI0003775CD3
scnpilot_solids2_trim150_scaffold_399_curated_28
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38481..39350
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZM9_HALH1
hypothetical protein
Tax=RBG_13_Bacteroidetes_46_8_curated
scnpilot_solids2_trim150_scaffold_399_curated_29
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

39385..39792
DNA (408bp) protein (136aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
6-pyruvoyl-tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI0003784ACD
scnpilot_solids2_trim150_scaffold_399_curated_30
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

40284..43817
DNA (3534bp) protein (1178aa)
hypothetical protein, partial n=1 Tax=Segetibacter koreensis RepID=UPI00037FBD2A
Uncharacterized protein {ECO:0000313|EMBL:AHJ99313.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
Displaying 30 items

View Taxonomy