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scnpilot_solids2_trim150_scaffold_632_curated

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_632_curated_1
unknown

Not on your lists

comp(2..100)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_632_curated_2
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(198..2624)
DNA (2427bp) protein (809aa)
TonB-dependent receptor n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ETH1_EMTOG
TonB-dependent receptor {ECO:0000313|EMBL:KGO11335.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
TonB-dependent receptor
scnpilot_solids2_trim150_scaffold_632_curated_3
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2735..3391
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HHW6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ61351.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
regulatory protein MarR
scnpilot_solids2_trim150_scaffold_632_curated_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3388..4863
DNA (1476bp) protein (492aa)
phytoene desaturase; K10027 phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
Phytoene desaturase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XX04_PEDHD
Phytoene desaturase {ECO:0000313|EMBL:ACU04298.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_632_curated_5
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4865..5701
DNA (837bp) protein (279aa)
Phytoene synthase n=1 Tax=Galbibacter marinus RepID=K2NYN3_9FLAO
Phytoene synthase {ECO:0000313|EMBL:EKF53893.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
phytoene synthase
scnpilot_solids2_trim150_scaffold_632_curated_6
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5698..5967
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XX02_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU04296.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_632_curated_7
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5909..6154
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XX02_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU04296.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_632_curated_8
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6161..6622
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2PN04_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF53895.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_632_curated_9
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6624..7082
DNA (459bp) protein (153aa)
fatty acid hydroxylase; K15746 beta-carotene 3-hydroxylase [EC:1.14.13.129]
Fatty acid hydroxylase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBT2_PEDSD
Fatty acid hydroxylase {ECO:0000313|EMBL:ADY52773.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_632_curated_10
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7079..7765
DNA (687bp) protein (229aa)
Lycopene cyclase n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HHW9_9SPHI
Lycopene cyclase {ECO:0000313|EMBL:ERJ61356.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
lycopene cyclase domain-containing protein
scnpilot_solids2_trim150_scaffold_632_curated_11
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7832..8308
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L511_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KHJ36481.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_632_curated_12
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8345..8905
DNA (561bp) protein (187aa)
Lipocalin family protein n=1 Tax=Galbibacter marinus RepID=K2NYN5_9FLAO
Lipocalin family protein {ECO:0000313|EMBL:EKF53898.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
lipocalin family protein; K03098 outer membrane lipoprotein Blc
scnpilot_solids2_trim150_scaffold_632_curated_13
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8895..10199
DNA (1305bp) protein (435aa)
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:ACU04292.1}; EC=4.1.99.3 {ECO:0000313|EMBL:ACU04292.1};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Deoxyribodipyrimidine photo-lyase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWZ8_PEDHD
scnpilot_solids2_trim150_scaffold_632_curated_14
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10196..11092
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2PZ55_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF53901.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein; K07071
scnpilot_solids2_trim150_scaffold_632_curated_15
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11569..12006)
DNA (438bp) protein (146aa)
Putative uncharacterized protein id=2995253 bin=GWF2_Bacteroidetes_35_48 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_632_curated_16
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12008..15106)
DNA (3099bp) protein (1033aa)
Acriflavin resistance protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFG8_FLUTR
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Tax=CG_Flavo_02
scnpilot_solids2_trim150_scaffold_632_curated_17
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15229..15588)
DNA (360bp) protein (120aa)
CHP02436-containing protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYZ3_HALH1
hypothetical protein
CHP02436-containing protein {ECO:0000313|EMBL:AEE52680.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_632_curated_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15660..16712)
DNA (1053bp) protein (351aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFG9_FLUTR
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEA45683.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_632_curated_19
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16738..18072)
DNA (1335bp) protein (445aa)
Outer membrane efflux protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFH0_FLUTR
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEA45684.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_632_curated_20
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18089..18475)
DNA (387bp) protein (129aa)
Putative uncharacterized protein id=2995268 bin=GWF2_Bacteroidetes_35_48 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_632_curated_21
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18485..18898)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFH7_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45691.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_632_curated_22
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18915..19241)
DNA (327bp) protein (109aa)
Cupin domain protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8ULS5_TANFA
cupin domain-containing protein
Cupin domain protein {ECO:0000313|EMBL:BAR52560.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
scnpilot_solids2_trim150_scaffold_632_curated_23
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19316..21826)
DNA (2511bp) protein (837aa)
ATPase P (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8]
ATPase P n=1 Tax=Galbibacter marinus RepID=K2PNC4_9FLAO
ATPase P {ECO:0000313|EMBL:EKF54050.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
scnpilot_solids2_trim150_scaffold_632_curated_24
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21849..22310)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1H1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK34186.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_632_curated_25
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22352..23479)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J1R9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ58914.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
RND family efflux transporter MFP subunit
scnpilot_solids2_trim150_scaffold_632_curated_26
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23487..27809)
DNA (4323bp) protein (1441aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HUF5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ58915.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
CzcA family heavy metal efflux protein
scnpilot_solids2_trim150_scaffold_632_curated_27
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27905..28288)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVU1_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07382.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_632_curated_28
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28308..28763)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2QH34_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF54057.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_632_curated_29
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28789..29379)
DNA (591bp) protein (197aa)
Transcriptional regulator n=1 Tax=Galbibacter marinus RepID=K2NZ10_9FLAO
Transcriptional regulator {ECO:0000313|EMBL:EKF54058.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_632_curated_30
unknown

Not on your lists

comp(29536..29778)
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying 30 items

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