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scnpilot_solids2_trim150_scaffold_439_curated

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_439_curated_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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1..663
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037F7FFA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_439_curated_2
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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926..4180
DNA (3255bp) protein (1085aa)
Gliding motility-related protein id=4615226 bin=GWF2_Bacteroidetes_35_48 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
adhesin AidA-related protein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_439_curated_3
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4350..6128
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI0003625655
Uncharacterized protein {ECO:0000313|EMBL:KGE87583.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
PKD domain-containing protein
scnpilot_solids2_trim150_scaffold_439_curated_4
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6183..8117
DNA (1935bp) protein (645aa)
PAS domain S-box n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YX87_AEQSU
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AFL81605.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
scnpilot_solids2_trim150_scaffold_439_curated_5
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8139..8555
DNA (417bp) protein (139aa)
Receiver component of a two-component response regulator n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LEV3_9BACT
Receiver component of a two-component response regulator {ECO:0000313|EMBL:EJF10230.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
scnpilot_solids2_trim150_scaffold_439_curated_6
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8653..9285
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z6G1_9CLOT
rhodanese-like protein
Putative polyketide biosynthesis zinc-dependent hydrolase BaeB {ECO:0000313|EMBL:CEJ69519.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
scnpilot_solids2_trim150_scaffold_439_curated_7
Brevibacillus agri, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9299..10948
DNA (1650bp) protein (550aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1246477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus agri BAB-2500.;"
glpA; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
Glycerol-3-phosphate dehydrogenase n=2 Tax=Brevibacillus RepID=J3B4J4_9BACL
scnpilot_solids2_trim150_scaffold_439_curated_8
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11031..11663
DNA (633bp) protein (211aa)
gliding motility protein n=1 Tax=Pedobacter agri RepID=UPI00029A4619
Gliding motility protein {ECO:0000313|EMBL:ETZ23462.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
outer membrane lipoprotein carrier protein LolA
scnpilot_solids2_trim150_scaffold_439_curated_9
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11939..21058
DNA (9120bp) protein (3040aa)
Adhesin AidA-related id=2603582 bin=GWF2_Bacteroidetes_33_38 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Uncharacterized protein {ECO:0000313|EMBL:EMR03656.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_439_curated_10
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

21138..21632
DNA (495bp) protein (165aa)
tetratricopeptide repeat-containing protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248F596
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_439_curated_11
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21646..23418)
DNA (1773bp) protein (591aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AEI51858.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEI51858.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Xenobiotic-transporting ATPase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBW2_RUNSL
scnpilot_solids2_trim150_scaffold_439_curated_12
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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23608..24516
DNA (909bp) protein (303aa)
Ppx/GppA phosphatase id=4917349 bin=GWC2_Bacteroidetes_33_15 species=Cellulophaga algicola genus=Cellulophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good +
exopolyphosphatase
Tax=GWD2_Bacteroidetes_33_33_curated
scnpilot_solids2_trim150_scaffold_439_curated_13
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24523..25395)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W9T9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGO87180.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_439_curated_14
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25563..28331)
DNA (2769bp) protein (923aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KS56_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KGE84883.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_439_curated_15

Not on your lists

comp(28400..28840)
DNA (441bp) protein (147aa)
ribosomal RNA large subunit methyltransferase h; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Prevotella sp. CAG:1185 RepID=R5M2N3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN08103.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_439_curated_16
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28841..29371)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KS57_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE52302.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_439_curated_17
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29414..29827)
DNA (414bp) protein (138aa)
Putative membrane protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C5D9_9FLAO
Putative membrane protein {ECO:0000313|EMBL:EIJ38832.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein; K08972 putative membrane protein
scnpilot_solids2_trim150_scaffold_439_curated_18
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29970..31508
DNA (1539bp) protein (513aa)
acetyl-CoA carboxylase, carboxyl transferase subunit alpha; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
Carboxyl transferase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FJ89_9BACT
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:AKD02131.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
scnpilot_solids2_trim150_scaffold_439_curated_19
unknown

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31729..32130
DNA (402bp) protein (134aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_439_curated_20
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

32186..32638
DNA (453bp) protein (151aa)
chemotaxis protein CheY n=1 Tax=Geovibrio thiophilus RepID=UPI0003B3B9E4
Response regulator {ECO:0000313|EMBL:KJH69588.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
rcp; response regulator rcp1
scnpilot_solids2_trim150_scaffold_439_curated_21
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

32642..33358
DNA (717bp) protein (239aa)
Response regulator receiver protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TCL4_METSL
Sensory transduction histidine kinase {ECO:0000313|EMBL:AKB12754.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;"
response regulator receiver protein
scnpilot_solids2_trim150_scaffold_439_curated_22
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33369..34466
DNA (1098bp) protein (366aa)
O-succinylbenzoic acid-CoA ligase {ECO:0000313|EMBL:KGL63969.1}; EC=6.2.1.26 {ECO:0000313|EMBL:KGL63969.1};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
O-succinylbenzoic acid--CoA ligase; K01911 O-succinylbenzoic acid--CoA ligase [EC:6.2.1.26]
O-succinylbenzoic acid--CoA ligase n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3UBL9_CROAH
scnpilot_solids2_trim150_scaffold_439_curated_23
Mangrovimonas yunxiaonensis, Mangrovimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34676..35890
DNA (1215bp) protein (405aa)
ATPase {ECO:0000313|EMBL:KFB01667.1}; TaxID=1197477 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Mangrovimonas.;" source="Mangrovimonas yunxiaonensis.;"
ATPase id=1902969 bin=GWE2_Bacteroidetes_40_15 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
ATPase
scnpilot_solids2_trim150_scaffold_439_curated_24
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36029..36457
DNA (429bp) protein (143aa)
Prophage antirepressor id=4312163 bin=GWF2_Lentisphaerae_38_69 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
DNA-damage-inducible protein d
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_439_curated_25
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36492..36785
DNA (294bp) protein (98aa)
hypothetical protein
Prophage antirepressor id=2043272 bin=GWD2_Bacteroidetes_33_33 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
Tax=GWD2_Bacteroidetes_33_33_curated
scnpilot_solids2_trim150_scaffold_439_curated_26
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37362..40553
DNA (3192bp) protein (1064aa)
CHU large protein; uncharacterized id=4439648 bin=GWF2_Bacteroidetes_35_48 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
Displaying 26 items

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