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scnpilot_solids2_trim150_scaffold_416_curated

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_416_curated_1
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(112..756)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EAR6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM37457.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
G-D-S-L family lipolytic protein
scnpilot_solids2_trim150_scaffold_416_curated_2
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

831..2690
DNA (1860bp) protein (620aa)
Divalent metal cation transporter MntH n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTY0_PEDHD
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
NRAMP family Mn2+/Fe2+ transporter; K03322 manganese transport protein
scnpilot_solids2_trim150_scaffold_416_curated_3
GWE1_OP11_38_10, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

2781..3785
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D8Y9_9BACT
Beta-lactamase class A-like protein {ECO:0000313|EMBL:KKQ50868.1}; TaxID=1618488 species="Bacteria; Microgenomates.;" source="Microgenomates (Shapirobacteria) bacterium GW2011_GWE1_38_10.;"
beta-lactamase class A
scnpilot_solids2_trim150_scaffold_416_curated_4
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3941..5137
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KY57_HALH1
hypothetical protein; K09808 lipoprotein-releasing system permease protein
Uncharacterized protein {ECO:0000313|EMBL:AEE53682.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_416_curated_5
unknown

Not on your lists

comp(5134..5568)
DNA (435bp) protein (145aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_416_curated_6

Not on your lists

5662..7068
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D852_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD94302.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_solids2_trim150_scaffold_416_curated_7
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7081..8454)
DNA (1374bp) protein (458aa)
PAS domain S-box id=3744283 bin=GWF2_Planctomycete_41_51 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
PAS/PAC sensor signal transduction histidine kinase
Tax=GWF2_Planctomycetes_41_51_curated
scnpilot_solids2_trim150_scaffold_416_curated_8
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8616..9038
DNA (423bp) protein (141aa)
DoxX family protein n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002557767
DoxX family protein {ECO:0000313|EMBL:KIA98252.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein; K15977 putative oxidoreductase
scnpilot_solids2_trim150_scaffold_416_curated_9
Sulfurihydrogenibium azorense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(9096..11195)
DNA (2100bp) protein (700aa)
ligA; DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=204536 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825).;"
DNA ligase n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=DNLJ_SULAA
scnpilot_solids2_trim150_scaffold_416_curated_10
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11243..12778)
DNA (1536bp) protein (512aa)
Peptidoglycan-binding lysin domain n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TVC5_MARTH
peptidoglycan-binding lysin domain
Peptidoglycan-binding lysin domain {ECO:0000313|EMBL:ADR23190.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
scnpilot_solids2_trim150_scaffold_416_curated_11
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12825..14159
DNA (1335bp) protein (445aa)
Membrane-bound serine protease (ClpP class) n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KW50_SOLCM
membrane-bound serine protease
Membrane-bound serine protease (ClpP class) {ECO:0000313|EMBL:AFD07071.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_416_curated_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14191..14733
DNA (543bp) protein (181aa)
Putative uncharacterized protein id=1809776 bin=GWD2_Bacteroidales_45_23 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids2_trim150_scaffold_416_curated_13
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14737..16257)
DNA (1521bp) protein (507aa)
Helix-turn-helix domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0C9_EMTOG
helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AFK05382.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_416_curated_14
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16433..17626
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DQK0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP96657.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_416_curated_15
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17627..18025)
DNA (399bp) protein (133aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1)
Lactoylglutathione lyase and related lyase n=1 Tax=unidentified eubacterium SCB49 RepID=A6EL52_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJJ38608.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
scnpilot_solids2_trim150_scaffold_416_curated_16
uncultured Flavobacteriia bacterium, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18093..18419
DNA (327bp) protein (109aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RG92_9BACT
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:CCG00053.1}; TaxID=212695 species="Bacteria; Bacteroidetes; Flavobacteriia; environmental samples.;" source="uncultured Flavobacteriia bacterium.;"
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein
scnpilot_solids2_trim150_scaffold_416_curated_17
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18481..19224
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y7I3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIF26596.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_416_curated_18
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19288..20220
DNA (933bp) protein (311aa)
ubiA; prenyltransferase (EC:2.5.1.-)
prenyltransferase id=5034406 bin=GWA2_Bacteroidetes_33_15 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
Tax=GWD2_Bacteroidetes_33_33_curated
scnpilot_solids2_trim150_scaffold_416_curated_19
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20222..20800
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Prevotella paludivivens RepID=UPI00036B5D59
Maf-like protein FH5T_14395 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
maf; Septum formation protein Maf; K06287 septum formation protein
scnpilot_solids2_trim150_scaffold_416_curated_20

Not on your lists

20797..22131
DNA (1335bp) protein (445aa)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3]
Dihydroorotase n=1 Tax=uncultured bacterium A1Q1_fos_97 RepID=L7W2L6_9BACT
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=1256593 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_97.;"
scnpilot_solids2_trim150_scaffold_416_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22138..23145
DNA (1008bp) protein (336aa)
UDP-galactose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-galactose 4-epimerase {ECO:0000313|EMBL:AEW03106.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AEW03106.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-galactose 4-epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT5_NIAKG
scnpilot_solids2_trim150_scaffold_416_curated_22
Bdellovibrio exovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23153..23629)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00035FCE43
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH94434.1}; TaxID=1184267 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio exovorus JSS.;"
scnpilot_solids2_trim150_scaffold_416_curated_23
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

24045..25022
DNA (978bp) protein (326aa)
Putative uncharacterized protein id=4337497 bin=GWF2_Bacteroidetes_35_48 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_416_curated_24
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25024..26901
DNA (1878bp) protein (626aa)
TonB-dependent receptor n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TLT5_MARTH
Uncharacterized protein {ECO:0000313|EMBL:KJS06871.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
tonb-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids2_trim150_scaffold_416_curated_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

26898..27938
DNA (1041bp) protein (347aa)
YVTN family beta-propeller repeat protein id=4368799 bin=GWF2_Bacteroidetes_35_48 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
YVTN family beta-propeller repeat protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_416_curated_26
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

27940..29073
DNA (1134bp) protein (378aa)
Periplasmic binding protein n=2 Tax=Chloroflexus RepID=A9WCZ4_CHLAA
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABY33563.1}; Flags: Precursor;; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
scnpilot_solids2_trim150_scaffold_416_curated_27
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29060..30088
DNA (1029bp) protein (343aa)
Probable ABC-type iron(III)-transport system, permease component n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GZL4_FLAPJ
Iron ABC transporter {ECO:0000313|EMBL:KFF04996.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
iron ABC transporter permease; K02015 iron complex transport system permease protein
scnpilot_solids2_trim150_scaffold_416_curated_28
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

30088..30780
DNA (693bp) protein (231aa)
iron-chelate-transporting ATPase (EC:3.6.3.34)
Iron-chelate-transporting ATPase {ECO:0000313|EMBL:AFY40237.1}; EC=3.6.3.34 {ECO:0000313|EMBL:AFY40237.1};; TaxID=111781 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7376.;"
Iron-chelate-transporting ATPase n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9Q630_9CYAN
scnpilot_solids2_trim150_scaffold_416_curated_29
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30861..31946
DNA (1086bp) protein (362aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Lewinella cohaerens RepID=UPI0003819559
scnpilot_solids2_trim150_scaffold_416_curated_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


31976..32437
DNA (462bp) protein (154aa)
50S ribosomal protein L17 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI97_NIAKG
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
50S ribosomal protein L17P; K02879 large subunit ribosomal protein L17
Displaying items 1-30 of 36 in total

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