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scnpilot_solids2_trim150_scaffold_416_curated_29

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 30861..31946

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 332.0
  • Bit_score: 478
  • Evalue 2.40e-132
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 332.0
  • Bit_score: 478
  • Evalue 8.10e-132
DNA-directed RNA polymerase subunit alpha n=1 Tax=Lewinella cohaerens RepID=UPI0003819559 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 332.0
  • Bit_score: 479
  • Evalue 3.40e-132

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Taxonomy

Phaeodactylibacter xiamenensis → Phaeodactylibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1086
GTGTTTTCTGCATTTGTATCGAATTATTTATTTGTGTTTTTAAATGTTTCTGCTACTTTTGCAGCCCTTATTGTAAAATCTAACCAAAATATGGGCATTTTAACGTTTCAAAAGCCAGATAAAATATCGCTTCAAAAGTCTACAGACTTCGAAGGAACATTTGAATTTAAACCATTAGAGCCAGGCTTCGGTGTTACTATTGGTAACGCTTTACGCAGAGTATTGCTTTCTTCATTAGAAGGTTATGCAATTTCAGGTGTGAAAATTTCAGGCGTAGATCATGAGTTTTCTACTATTAAAGGTGTAATTGAAGATGTAACCGAAATCGTTTTAAACTTAAAGCAAGTTCGTCTTAAAAAAGTATTGGACGAAGAAAGCCAAAACGAAAAAGTATATATTTCTATTAAAGGTTCTGAAACATTCCAAGCAGGTGCAATTGAAAAATTCACTAGTGTTTACCATGTAATGAATCCTGATTTAGTGATTTGCAATTTAGAGCCATCTGTAACTTTAGAATTAGAATTAACTATTACTAAAGGAAGAGGTTATGTTCCTGCTGATGAAAGCACAGCAAGAGAATTACCTATTGGTTACATTGCTACTGATGCTATTTATACACCAATTAGAAATGTAAAATACACTGTTGAACCTTTCCGTGTTGAGCAGCGTGTGGATTTCGAAAAATTGATTTTAGATATCACTACCGATGGAACAATTCATCCGGAAGAAGCTGTAAAAGAAGCATCACGTATTTTAATTCAGCACCTAATGTTGATTACTGACGAGCATATTTCTTTTGATACGCCTACTGCAGTTGAGCATGATGTAGTTGATGAGCAAGTATTGCATTTGCGTAAATTGCTAAAAACTTCTTTGGAAGATTTGGATTTAAGCGTTCGTGCATTCAACTGTTTGAAAGCAGCTAAAATAAACAGCTTGGAAGAGTTGGTTTCTTTCAATACAAACGATTTATTGAAGTTCCGTAACTTCGGTAAGAAGAGTTTGGTAGAAATTGAAGCACTTTTACACGAGAAAGGCTTGAGCTTTGGAATGGATTTAAGCAAATTAAGATTAGACGAAGAATAA
PROTEIN sequence
Length: 362
VFSAFVSNYLFVFLNVSATFAALIVKSNQNMGILTFQKPDKISLQKSTDFEGTFEFKPLEPGFGVTIGNALRRVLLSSLEGYAISGVKISGVDHEFSTIKGVIEDVTEIVLNLKQVRLKKVLDEESQNEKVYISIKGSETFQAGAIEKFTSVYHVMNPDLVICNLEPSVTLELELTITKGRGYVPADESTARELPIGYIATDAIYTPIRNVKYTVEPFRVEQRVDFEKLILDITTDGTIHPEEAVKEASRILIQHLMLITDEHISFDTPTAVEHDVVDEQVLHLRKLLKTSLEDLDLSVRAFNCLKAAKINSLEELVSFNTNDLLKFRNFGKKSLVEIEALLHEKGLSFGMDLSKLRLDEE*