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scnpilot_solids2_trim150_scaffold_120_curated

Search features with annotation key words

Displaying items 31-60 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_120_curated_31
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44738..47626)
DNA (2889bp) protein (963aa)
Translation initiation factor IF-2 n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB22_9SPHI
translation initiation factor IF-2; K02519 translation initiation factor IF-2
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_solids2_trim150_scaffold_120_curated_32
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47767..49014)
DNA (1248bp) protein (416aa)
NusA antitermination factor n=1 Tax=Niabella soli DSM 19437 RepID=H1NR37_9SPHI
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
NusA antitermination factor; K02600 N utilization substance protein A
scnpilot_solids2_trim150_scaffold_120_curated_33
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(49042..49593)
DNA (552bp) protein (184aa)
Ribosome maturation factor RimP n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPA7_EMTOG
Ribosome maturation factor rimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_120_curated_34
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

49700..51178
DNA (1479bp) protein (493aa)
PKD domain containing protein id=3606236 bin=GWF2_Bacteroidetes_43_63 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
PKD domain-containing protein
Tax=GWF2_Bacteroidetes_43_63_curated
scnpilot_solids2_trim150_scaffold_120_curated_35
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(51181..51819)
DNA (639bp) protein (213aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_120_curated_36
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(51792..52481)
DNA (690bp) protein (230aa)
Uncharacterized protein id=2619158 bin=GWF2_Bacteroidetes_43_63 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_120_curated_37
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52785..53639
DNA (855bp) protein (285aa)
PKD domain containing protein id=4470585 bin=GWF2_Bacteroidetes_35_48 species=Methanoregula boonei genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_120_curated_38
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

53744..54616
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8QZ56_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV31439.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_120_curated_39
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54789..55253
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMR4_RUNSL
Uncharacterized protein {ECO:0000313|EMBL:KGD60409.1}; TaxID=1177181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax jadensis T9.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_120_curated_40
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

55298..56152
DNA (855bp) protein (285aa)
id=2934296 bin=GWF2_Bacteroidetes_33_38 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_120_curated_41
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

56332..57387
DNA (1056bp) protein (352aa)
nuoG; NADH dehydrogenase I subunit G subunit N-terminal region (EC:1.6.99.5); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3]
NADH dehydrogenase I, G subunit, N-terminal region {ECO:0000313|EMBL:CCB68737.1}; EC=1.6.99.5 {ECO:0000313|EMBL:CCB68737.1};; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
NADH dehydrogenase I, G subunit, N-terminal region n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z5X7_FLABF
scnpilot_solids2_trim150_scaffold_120_curated_42
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

57471..58523
DNA (1053bp) protein (351aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
NADH dehydrogenase (quinone) (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003462BC2
scnpilot_solids2_trim150_scaffold_120_curated_43
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(58550..60598)
DNA (2049bp) protein (683aa)
Polyphosphate kinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MCG7_9EURY
Polyphosphate kinase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_120_curated_44
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

60686..61750
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00035D86D4
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
scnpilot_solids2_trim150_scaffold_120_curated_45
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61755..64052)
DNA (2298bp) protein (766aa)
Putative uncharacterized protein id=1995096 bin=GWD2_Bacteroidetes_33_33 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
Tax=GWD2_Bacteroidetes_33_33_curated
scnpilot_solids2_trim150_scaffold_120_curated_46
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(64214..65452)
DNA (1239bp) protein (413aa)
CinA-like protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG89_CHIPD
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA
scnpilot_solids2_trim150_scaffold_120_curated_47
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(65495..66415)
DNA (921bp) protein (307aa)
family 2 glycosyl transferase (EC:2.4.1.83)
Glycosyltransferase id=3960807 bin=GWF2_Bacteroidetes_38_335 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids2_trim150_scaffold_120_curated_48
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(66412..67467)
DNA (1056bp) protein (352aa)
Beta-ketoacyl-acyl-carrier-protein synthase I id=3906966 bin=GWF2_Bacteroidetes_43_11 species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
3-oxoacyl-ACP synthase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_120_curated_49
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(67472..67696)
DNA (225bp) protein (75aa)
Uncharacterized protein n=6 Tax=Bacteroides fragilis RepID=E4VU75_BACFG
acyl carrier protein
Uncharacterized protein {ECO:0000313|EMBL:EFR51457.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
scnpilot_solids2_trim150_scaffold_120_curated_50
unknown

Not on your lists

67786..68397
DNA (612bp) protein (204aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_120_curated_51
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

68421..68804
DNA (384bp) protein (128aa)
Enamine/imine deaminase {ECO:0000313|EMBL:EKB48475.1}; EC=3.5.4.- {ECO:0000313|EMBL:EKB48475.1};; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
Enamine/imine deaminase n=1 Tax=Cecembia lonarensis LW9 RepID=K1KWE0_9BACT
endoribonuclease L-PSP
scnpilot_solids2_trim150_scaffold_120_curated_52
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(68815..70857)
DNA (2043bp) protein (681aa)
Putative uncharacterized protein id=2012015 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
scnpilot_solids2_trim150_scaffold_120_curated_53
unknown

Not on your lists

comp(70904..71791)
DNA (888bp) protein (296aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_120_curated_54
unknown

Not on your lists

comp(71775..72446)
DNA (672bp) protein (224aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_120_curated_55
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(72439..73896)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBN4_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KGE86139.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
scnpilot_solids2_trim150_scaffold_120_curated_56
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(73918..74838)
DNA (921bp) protein (307aa)
glycosyl transferase family protein (EC:2.4.1.-)
Putative uncharacterized protein id=4439708 bin=GWF2_Bacteroidetes_35_48 species=Rivularia sp. PCC 7116 genus=Rivularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_120_curated_57
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(74853..75962)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VQW0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPR71712.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_120_curated_58
unknown

Not on your lists

comp(75962..76675)
DNA (714bp) protein (238aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_120_curated_59
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(76746..77522)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QGX9_SPILD
Uncharacterized protein {ECO:0000313|EMBL:GAL86699.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_120_curated_60
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(77561..78169)
DNA (609bp) protein (203aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K301_9FLAO
Hexapeptide transferase {ECO:0000313|EMBL:KGO89376.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hexapeptide transferase family protein
Displaying items 31-60 of 89 in total

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