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scnpilot_solids2_trim150_scaffold_120_curated

Search features with annotation key words

Displaying items 61-89 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_120_curated_61
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

78435..79511
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFV5_CHIPD
peptide chain release factor 1; K02835 peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_120_curated_62
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

79680..80159
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R414_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV32046.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_120_curated_63
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(80252..80605)
DNA (354bp) protein (118aa)
Gliding motility-associated protein id=14426614 bin=bin1_lowGC species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_120_curated_64
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(80640..81599)
DNA (960bp) protein (320aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase associated with various cellular activities AAA_3 n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYR6_HALH1
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:AEE51458.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_120_curated_65
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

81863..82435
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EYA3_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK04656.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_120_curated_66
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

82445..84658
DNA (2214bp) protein (738aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
Peptidoglycan glycosyltransferase id=4081516 bin=GWF2_Bacteroidetes_43_63 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
Tax=GWF2_Bacteroidetes_43_63_curated
scnpilot_solids2_trim150_scaffold_120_curated_67
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(84667..85857)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X136_BACMS
hypothetical protein
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_120_curated_68
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(85835..86443)
DNA (609bp) protein (203aa)
sigma-70 family RNA polymerase sigma factor id=4204415 bin=GWF2_Bacteroidetes_38_335 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
sigma-70 family RNA polymerase sigma factor
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_120_curated_69
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(86443..89058)
DNA (2616bp) protein (872aa)
peptidase M1 membrane alanine aminopeptidase; K01256 aminopeptidase N [EC:3.4.11.2]
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRM2_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KJS05331.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
scnpilot_solids2_trim150_scaffold_120_curated_70
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

89222..91033
DNA (1812bp) protein (604aa)
ABC transporter ATP-binding protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003778792
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS07569.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
yliA; ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_120_curated_71
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(91165..92211)
DNA (1047bp) protein (349aa)
adhesin AidA-related protein
Peptidase C25 gingipain id=2596646 bin=GWF2_Bacteroidetes_38_335 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_120_curated_72
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(92440..93483)
DNA (1044bp) protein (348aa)
Zn-dependent alcohol dehydrogenase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMJ7_SOLCM
Hydroxyacid dehydrogenase {ECO:0000313|EMBL:AIZ63189.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
Zn-dependent alcohol dehydrogenase
scnpilot_solids2_trim150_scaffold_120_curated_73
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

93776..94375
DNA (600bp) protein (200aa)
CRISPR-associated endonuclease Cas1 n=1 Tax=Porphyromonas cansulci JCM 13913 RepID=S4NDB9_9PORP
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_solids2_trim150_scaffold_120_curated_74
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94341..94646
DNA (306bp) protein (102aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NP35_9FIRM
hypothetical protein
scnpilot_solids2_trim150_scaffold_120_curated_75
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

95184..95615
DNA (432bp) protein (144aa)
Very short patch repair protein; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Putative uncharacterized protein id=4672728 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=GWC2_Nitrospirae_42_7_curated
scnpilot_solids2_trim150_scaffold_120_curated_76
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

95587..96864
DNA (1278bp) protein (426aa)
hpaIIM; Type II modification methyltransferase HpaII (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
Cytosine-specific methyltransferase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H1V6_FLAPJ
scnpilot_solids2_trim150_scaffold_120_curated_77
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

96861..97484
DNA (624bp) protein (208aa)
Uncharacterized protein id=4672726 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=GWC2_Nitrospirae_42_7_curated
scnpilot_solids2_trim150_scaffold_120_curated_78
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

Not on your lists

97495..99282
DNA (1788bp) protein (596aa)
Putative uncharacterized protein id=3066308 bin=GWF2_Lentisphaerae_38_69 species=Bacteroides sp. 1_1_30 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
ATPase
Tax=GWF2_Lentisphaerae_38_69_curated
scnpilot_solids2_trim150_scaffold_120_curated_79
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

99777..100193
DNA (417bp) protein (139aa)
glyoxalase n=1 Tax=Pedobacter agri RepID=UPI00029A4743
Uncharacterized protein {ECO:0000313|EMBL:EDM34628.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_solids2_trim150_scaffold_120_curated_80
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

100201..100662
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMR2_FLAJ1
MarR family transcriptional regulator {ECO:0000313|EMBL:KFF02953.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
MarR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_120_curated_81
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

101757..101933
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UXB7_9AQUI
Uncharacterized protein {ECO:0000313|EMBL:EDP74738.1}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_120_curated_82
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

101949..102875
DNA (927bp) protein (309aa)
cyoA; heme/copper-type cytochrome/quinol oxidase subunit 2; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit II n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFL9_HYDTT
Heme/copper-type cytochrome/quinol oxidase subunit 2 {ECO:0000313|EMBL:BAI68621.1}; TaxID=608538 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
scnpilot_solids2_trim150_scaffold_120_curated_83
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

102887..104554
DNA (1668bp) protein (556aa)
cyoB; heme/copper-type cytochrome/quinol oxidase subunit 1; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome c oxidase subunit I n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFL8_HYDTT
Heme/copper-type cytochrome/quinol oxidase subunit 1 {ECO:0000313|EMBL:BAI68620.1}; TaxID=608538 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
scnpilot_solids2_trim150_scaffold_120_curated_84
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

104576..105358
DNA (783bp) protein (261aa)
Electron transport protein SCO1/SenC n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFL6_HYDTT
electron transport protein SCO1/SenC
SCO1/SenC/PrrC family protein {ECO:0000313|EMBL:BAI68618.1}; TaxID=608538 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
scnpilot_solids2_trim150_scaffold_120_curated_85
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

105355..107271
DNA (1917bp) protein (639aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFM1_HYDTT
4Fe-4S ferredoxin
Cytochrome b/b6 {ECO:0000313|EMBL:BAI68623.1}; TaxID=608538 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
scnpilot_solids2_trim150_scaffold_120_curated_86
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

107341..108618
DNA (1278bp) protein (426aa)
Peptidase M16 domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIL4_CHIPD
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ACU58203.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_120_curated_87
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(108694..109044)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SEY4_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY54052.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_120_curated_88
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(109059..109607)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NL20_9SPHI
Membrane protein {ECO:0000313|EMBL:AHF14343.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein; K08995 putative membrane protein
scnpilot_solids2_trim150_scaffold_120_curated_89
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

109865..110458
DNA (594bp) protein (198aa)
Alkaline phosphatase (EC:3.1.3.1); K01113 alkaline phosphatase D [EC:3.1.3.1]
Hypothetical conserved protein n=1 Tax=uncultured Bacteroidetes bacterium RepID=H5SGI1_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL55267.1}; TaxID=152509 species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
Displaying items 61-89 of 89 in total

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