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scnpilot_solids2_trim150_scaffold_120_curated_68

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(85835..86443)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor id=4204415 bin=GWF2_Bacteroidetes_38_335 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 190.0
  • Bit_score: 187
  • Evalue 1.50e-44
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 185.0
  • Bit_score: 176
  • Evalue 6.30e-42
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 193.0
  • Bit_score: 201
  • Evalue 1.40e-48

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 609
GTGAGCCACAATTCACCATATAGCAATTTGAGTGATGAGGAGCTAATAAACCGCTACCGAAATTCGCACGACTTAAAGTATGTGGGAGAGCTTTATCATCGCTACAGCCATTTAGCTTATGGTGTGTGCTTAAAGTATTTTAAAAATGATGCCGCTGCACAAGATGCTGTGATGCAAATTTTTGAAAAACTTATTACCGATTTAAAAAAATATCATGTTGCTATTTTTAAATCTTGGTTGCATACCGTGATAAGAAACCATTGCATGATGCAGTTTAGAACGAATACTGCGACAGTTAGAAATGTGCAAGAATATAAACAAGAAATGCAAAATGAACCACAGTTTGATATGGAAAATCAACTGGAATTGCATCTAGAAGCTGCCGAAGAGAAAGAATGGCTTTTAAAGCACTTAAACGAAAGCATAAACGACTTGCGCGATGAACAAAAAACTTGTGTTGAACTATTTTATCTTAAAGAAAAAAGTTATCAAGAAATTAGTGCCATCACCGGTTATTCGCTGAATGAAGTAAAGAGCTATATTCAAAATGGGAAAAGAAATTTAAAGAATATAATTATCGCAAAACATGAGCGGGCAAAGGAAAAATAA
PROTEIN sequence
Length: 203
VSHNSPYSNLSDEELINRYRNSHDLKYVGELYHRYSHLAYGVCLKYFKNDAAAQDAVMQIFEKLITDLKKYHVAIFKSWLHTVIRNHCMMQFRTNTATVRNVQEYKQEMQNEPQFDMENQLELHLEAAEEKEWLLKHLNESINDLRDEQKTCVELFYLKEKSYQEISAITGYSLNEVKSYIQNGKRNLKNIIIAKHERAKEK*