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scnpilot_solids2_trim150_scaffold_107_curated

Search features with annotation key words

Displaying items 61-90 of 205 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_107_curated_61
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

65560..67257
DNA (1698bp) protein (566aa)
oligoendopeptidase, M3 family; K01417 [EC:3.4.24.-]
oligoendopeptidase F n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI00030E6FA1
Peptidase family M3 {ECO:0000313|EMBL:KHF35556.1}; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
scnpilot_solids2_trim150_scaffold_107_curated_62
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(67197..68282)
DNA (1086bp) protein (362aa)
glycosyl transferase (EC:2.4.1.-)
Putative uncharacterized protein id=2837590 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_107_curated_63
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(68356..70251)
DNA (1896bp) protein (632aa)
30S ribosomal protein S1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMB8_CHIPD
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1
RNA binding S1 domain protein {ECO:0000313|EMBL:ACU64023.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_107_curated_64
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

70483..71718
DNA (1236bp) protein (412aa)
Major facilitator superfamily MFS_1 id=4666928 bin=GWF2_Melioribacter_38_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
major facilitator superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_107_curated_65
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(71723..73966)
DNA (2244bp) protein (748aa)
(p)ppGpp synthetase I SpoT/RelA; K00951 GTP pyrophosphokinase [EC:2.7.6.5]
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ACU64452.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ACU64452.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSK3_CHIPD
scnpilot_solids2_trim150_scaffold_107_curated_66
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(74156..77182)
DNA (3027bp) protein (1009aa)
TonB-dependent receptor n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVU3_HALH1
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEE53518.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_107_curated_67
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(77186..78925)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVU2_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE53517.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_107_curated_68
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

79254..82283
DNA (3030bp) protein (1010aa)
Outer membrane receptor protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R0W9_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:KFD38851.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
outer membrane receptor protein
scnpilot_solids2_trim150_scaffold_107_curated_69

Not on your lists

comp(82280..83554)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002E8E12F
Uncharacterized protein {ECO:0000313|EMBL:KKL58238.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_107_curated_70
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

83832..84533
DNA (702bp) protein (234aa)
tRNA (adenine-N(6)-)-methyltransferase; K15460 tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872}; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC; 16016 / NCTC 11634 / CL345/78).;"
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P293_WEEVC
scnpilot_solids2_trim150_scaffold_107_curated_71
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

84657..86450
DNA (1794bp) protein (598aa)
fadD; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase n=1 Tax=Pontibacter roseus RepID=UPI00035F51D4
AMP-dependent synthetase {ECO:0000313|EMBL:AKD02492.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
scnpilot_solids2_trim150_scaffold_107_curated_72
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

86467..87459
DNA (993bp) protein (331aa)
galE; NAD dependent epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Saprospira grandis DSM 2844 RepID=J1I4Q1_9SPHI
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EJF53338.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
scnpilot_solids2_trim150_scaffold_107_curated_73
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(87538..90165)
DNA (2628bp) protein (876aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXW7_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05643.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_107_curated_74
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(90345..92378)
DNA (2034bp) protein (678aa)
excinuclease ABC subunit B n=1 Tax=Segetibacter koreensis RepID=UPI00036E309B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
UvrABC system protein B; K03702 excinuclease ABC subunit B
scnpilot_solids2_trim150_scaffold_107_curated_75
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(92393..93658)
DNA (1266bp) protein (422aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
lysine-sensitive aspartokinase III; K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H5I4_9SPHI
scnpilot_solids2_trim150_scaffold_107_curated_76
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(93701..94186)
DNA (486bp) protein (162aa)
diamine n-acetyltransferase (EC:2.3.1.57)
GNAT family acetyltransferase n=1 Tax=Pontibacter roseus RepID=UPI00036A9B80
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_107_curated_77
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

94498..95754
DNA (1257bp) protein (419aa)
Sterol desaturase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JN74_9BACT
Sterol desaturase {ECO:0000313|EMBL:ELR68812.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
sterol desaturase
scnpilot_solids2_trim150_scaffold_107_curated_78
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(95762..96337)
DNA (576bp) protein (192aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21]
Thymidine kinase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NZ29_9BACT
scnpilot_solids2_trim150_scaffold_107_curated_79
unknown

Not on your lists

96391..97251
DNA (861bp) protein (287aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_107_curated_80
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(97281..97598)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C0T9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ37232.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_107_curated_81
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(97611..98204)
DNA (594bp) protein (198aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQ98_EMTOG
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:AHJ96125.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
scnpilot_solids2_trim150_scaffold_107_curated_82
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

98718..99458
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003619AA2
Uncharacterized protein {ECO:0000313|EMBL:GAL83866.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_107_curated_83
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

99476..100831
DNA (1356bp) protein (452aa)
Peptidyl-prolyl cis-trans isomerase id=2692904 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
parvulin-like peptidyl-prolyl isomerase
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_solids2_trim150_scaffold_107_curated_84
unknown

Not on your lists

comp(100840..101727)
DNA (888bp) protein (296aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_107_curated_85
unknown

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comp(101720..102337)
DNA (618bp) protein (206aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_107_curated_86
unknown

Not on your lists

102412..103674
DNA (1263bp) protein (421aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_107_curated_87
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

103752..104855
DNA (1104bp) protein (368aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
Phosphoserine aminotransferase n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9QTY0_RIEAN
Phosphoserine aminotransferase
scnpilot_solids2_trim150_scaffold_107_curated_88
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

104852..105631
DNA (780bp) protein (260aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035E61DA
TatD family hydrolase {ECO:0000313|EMBL:AHF15640.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids2_trim150_scaffold_107_curated_89
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

105664..107115
DNA (1452bp) protein (484aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
glutamyl-tRNA amidotransferase subunit B n=1 Tax=Echinicola pacifica RepID=UPI00036C4D88
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit B
scnpilot_solids2_trim150_scaffold_107_curated_90
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(107134..108102)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370765B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE53860.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Displaying items 61-90 of 205 in total

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