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scnpilot_solids2_trim150_scaffold_289_curated

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_289_curated_1
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1243)
DNA (1242bp) protein (414aa)
alkH; Aldehyde dehydrogenase AlkH (EC:1.2.1.3)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000368C5BA
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
scnpilot_solids2_trim150_scaffold_289_curated_2
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1381..2535
DNA (1155bp) protein (385aa)
N-acetyl-alpha-D-glucosaminyl L-malate synthase n=1 Tax=Pedobacter agri RepID=UPI00029B2C47
Contig76, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76000.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
group 1 glycosyl transferase
scnpilot_solids2_trim150_scaffold_289_curated_3
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2553..3326
DNA (774bp) protein (258aa)
NLP/P60 protein id=3163132 bin=GWA2_Bacteroidetes_42_15 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
cell wall-associated hydrolase
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
scnpilot_solids2_trim150_scaffold_289_curated_4
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3335..4159)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034BD0D5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR20985.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
scnpilot_solids2_trim150_scaffold_289_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4216..5256)
DNA (1041bp) protein (347aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3]
selenophosphate synthetase n=1 Tax=Niabella aurantiaca RepID=UPI00037631C5
scnpilot_solids2_trim150_scaffold_289_curated_6
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5259..6287)
DNA (1029bp) protein (343aa)
tRNA 2-selenouridine synthase; K06917 tRNA 2-selenouridine synthase [EC:2.9.1.-]
tRNA 2-selenouridine synthase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQV6_RUNSL
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_289_curated_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6543..7742
DNA (1200bp) protein (400aa)
Beta-lactamase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB75_CHIPD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACU61213.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_289_curated_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7834..8892
DNA (1059bp) protein (353aa)
MscS Mechanosensitive ion channel n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Y2_PALPW
mscs mechanosensitive ion channel; K16052 MscS family membrane protein YnaI
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ADQ79426.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_solids2_trim150_scaffold_289_curated_9
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8899..10269)
DNA (1371bp) protein (457aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KGE87911.1}; EC=6.4.1.2 {ECO:0000313|EMBL:KGE87911.1};; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
accC; acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
acetyl-CoA carboxylase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI00036CA828
scnpilot_solids2_trim150_scaffold_289_curated_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10307..10807)
DNA (501bp) protein (167aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUB5_CHIPD
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:ACU59155.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_289_curated_11
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10904..11464)
DNA (561bp) protein (187aa)
Elongation factor P n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JHC2_9BACT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
translation elongation factor p (ef-p); K02356 elongation factor P
scnpilot_solids2_trim150_scaffold_289_curated_12
unknown

Not on your lists

11562..11939
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_289_curated_13
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11995..12831)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B6BB62
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG52849.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
scnpilot_solids2_trim150_scaffold_289_curated_14
Dokdonia donghaensis, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13150..13794)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Psychroflexus tropicus RepID=UPI0003827485
NUDIX hydrolase {ECO:0000313|EMBL:KGO06040.1}; TaxID=1300343 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" source="Dokdonia donghaensis DSW-1.;"
coenzyme A pyrophosphatase (CoAse)
scnpilot_solids2_trim150_scaffold_289_curated_15
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13853..15040
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00035CB0B1
Uncharacterized protein {ECO:0000313|EMBL:KGE87276.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_289_curated_16
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

15037..15534
DNA (498bp) protein (166aa)
Putative uncharacterized protein id=3680979 bin=GWF2_Bacteroidetes_35_48 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_289_curated_17
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15560..17047)
DNA (1488bp) protein (496aa)
degQ; serine protease (EC:3.4.21.-); K01362 [EC:3.4.21.-]
Serine protease {ECO:0000313|EMBL:ABG57346.1}; EC=3.4.21.- {ECO:0000313|EMBL:ABG57346.1};; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
serine protease n=1 Tax=Cytophaga aurantiaca RepID=UPI0003793FF8
scnpilot_solids2_trim150_scaffold_289_curated_18
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17176..17958
DNA (783bp) protein (261aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7]
Diaminopimelate epimerase n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J518_9FLAO
scnpilot_solids2_trim150_scaffold_289_curated_19
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

17967..18965
DNA (999bp) protein (333aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE23_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_289_curated_20
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


19050..21659
DNA (2610bp) protein (870aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9]
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000376E4DC
scnpilot_solids2_trim150_scaffold_289_curated_21
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21659..22615
DNA (957bp) protein (319aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
TsaC protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JTL5_9BACT
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
scnpilot_solids2_trim150_scaffold_289_curated_22
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22727..23305
DNA (579bp) protein (193aa)
YceI family protein id=4580960 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
YceI family protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
scnpilot_solids2_trim150_scaffold_289_curated_23
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23383..23844
DNA (462bp) protein (154aa)
Transcriptional regulator n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRA8_SOLCM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFD07375.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_289_curated_24
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23989..25026
DNA (1038bp) protein (346aa)
potassium transporter peripheral membrane component; K10255 omega-6 fatty acid desaturase (delta-12 desaturase) [EC:1.14.19.-]
Potassium transporter peripheral membrane component n=1 Tax=Kordia algicida OT-1 RepID=A9DMZ8_9FLAO
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:EDP97824.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
scnpilot_solids2_trim150_scaffold_289_curated_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25303..26160)
DNA (858bp) protein (286aa)
HIRAN domain-containing protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJM2_9SPHI
HIRAN protein {ECO:0000313|EMBL:AHF14198.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hiran domain protein
scnpilot_solids2_trim150_scaffold_289_curated_26
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26219..27322)
DNA (1104bp) protein (368aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
CRISPR-associated protein, Csn1 family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VKD0_9SPHI
CRISPR-associated protein, Csn1 family; K09952 hypothetical protein
scnpilot_solids2_trim150_scaffold_289_curated_27
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27513..28433
DNA (921bp) protein (307aa)
metallophosphoesterase; K01081 5'-nucleotidase [EC:3.1.3.5]
Metallophosphoesterase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XXX1_PEDHD
Metallophosphoesterase {ECO:0000313|EMBL:ETZ22462.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_solids2_trim150_scaffold_289_curated_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28650..30086
DNA (1437bp) protein (479aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9R7_CHIPD
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_289_curated_29
unknown

Not on your lists

30161..30550
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_289_curated_30
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30720..32372
DNA (1653bp) protein (551aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Sensor protein zraS n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GK46_9BACT
ATP-binding region ATPase domain protein
Displaying items 1-30 of 50 in total

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