ggKbase home page

scnpilot_solids2_trim150_scaffold_2163_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2163_curated_1
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..244)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUM7_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE53430.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_2163_curated_2
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(286..831)
DNA (546bp) protein (182aa)
Uncharacterized protein {ECO:0000313|EMBL:AHW61260.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
Uncharacterized protein id=3592243 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
scnpilot_solids2_trim150_scaffold_2163_curated_3
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(913..1710)
DNA (798bp) protein (266aa)
short-chain dehydrogenase/reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-acyl carrier proteinreductase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZM82_9BACT
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_2163_curated_4
Shewanella violacea, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1711..3405)
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365B8DE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ01662.1}; TaxID=637905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 /; DSS12).;"
scnpilot_solids2_trim150_scaffold_2163_curated_5
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3554..4663
DNA (1110bp) protein (370aa)
peptidase M29 aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-]
Peptidase M29 aminopeptidase II n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L1X0_HALH1
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:AEE50603.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_2163_curated_6
unknown

Not on your lists

4711..5199
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2163_curated_7
unknown

Not on your lists

comp(5246..5560)
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2163_curated_8
unknown

Not on your lists

5624..5761
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2163_curated_9
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5795..6973
DNA (1179bp) protein (393aa)
acyl-CoA dehydrogenase domain-containing protein (EC:1.3.99.7); K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDK3_9SPHI
Contig90, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75626.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
scnpilot_solids2_trim150_scaffold_2163_curated_10
GWA2_Melainabacteria_34_9_curated, Melainabacteria, Bacteria

Not on your lists

7027..8307
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DAT7_9BACT
Na+ dependent nucleoside transporter domain-containing protein; K03317 concentrative nucleoside transporter, CNT family
Tax=GWA2_Melainabacteria_34_9_curated
scnpilot_solids2_trim150_scaffold_2163_curated_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8311..9123
DNA (813bp) protein (271aa)
murQ; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitino
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL32_CHIPD
scnpilot_solids2_trim150_scaffold_2163_curated_12
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9219..9515
DNA (297bp) protein (99aa)
Putative membrane protein n=2 Tax=Gordonia polyisoprenivorans RepID=H6MW73_GORPV
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFA72887.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (strain DSM 44266 / VH2).;"
scnpilot_solids2_trim150_scaffold_2163_curated_13
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9519..9920)
DNA (402bp) protein (134aa)
DoxX family protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BYM0_9FLAO
hypothetical protein; K15977 putative oxidoreductase
Tax=CG_Flavo_01
scnpilot_solids2_trim150_scaffold_2163_curated_14
unknown

Not on your lists

9967..10131
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2163_curated_15
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10064..10981)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A83EB
Pirin {ECO:0000313|EMBL:AKD02572.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
Pirin domain-containing protein; K06911
Displaying 15 items

View Taxonomy