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scnpilot_solids2_trim150_scaffold_340_curated_14

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 21913..22521

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A7017 similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 201.0
  • Bit_score: 240
  • Evalue 1.90e-60
Sigma-24 {ECO:0000313|EMBL:GAF02545.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 201.0
  • Bit_score: 244
  • Evalue 1.40e-61
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 199.0
  • Bit_score: 234
  • Evalue 2.60e-59

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Taxonomy

Saccharicrinis fermentans → Saccharicrinis → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 609
TTGGAACTAAATTCAAAATTTTCACCGCGAGCTAAAGAGGACATGGAGTTGGTGGTTCTTGCACAGCAAGGCAACCAGCAATCGTTTGCCAAACTAATGGAGCGCTACCGCGACAGCATCTATTTTATGGTGCTTAAAATGGTTCATAATAGAGATGATGCCGAAGATTTAACGCAAGAAGCGTTTAGCAAAGCATTTAATAGTTTAAGGAATTACAGCGCAGAATATGCTTTCAGCACTTGGCTGTTTAAAATTGCAACGAATAACTGTATTGATTTTATCCGGAAAAAAAGACTGCAAACTACTTCATTAGATTCTTCTACTATTACGAACGAAGAAGGAGAGTCTCCAACTATTGCGGTAGCAGATTACAATCCAAACCCGGAGCAAAGTATTATTAAAGAACAGCGAGCTGCACGCATAAGAGAAGTGATAGAAAAATTATCACCAAAGTATAAGCAGCTTATTGAAATGCGCTATTTTGACGAGTTGAGCTACGAAGAAATTGCTGCTCAATTAGATTTGCCGCTTGGTACAGTAAAAGCACAACTTTTTAGGGCGAAAGATTTACTTTTCAACCTACTTAAAAGCACTCAAGCAAAATACTAA
PROTEIN sequence
Length: 203
LELNSKFSPRAKEDMELVVLAQQGNQQSFAKLMERYRDSIYFMVLKMVHNRDDAEDLTQEAFSKAFNSLRNYSAEYAFSTWLFKIATNNCIDFIRKKRLQTTSLDSSTITNEEGESPTIAVADYNPNPEQSIIKEQRAARIREVIEKLSPKYKQLIEMRYFDELSYEEIAAQLDLPLGTVKAQLFRAKDLLFNLLKSTQAKY*