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scnpilot_solids2_trim150_scaffold_340_curated

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_340_curated_1
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

357..800
DNA (444bp) protein (148aa)
UPI0003D5D387 related cluster n=1 Tax=unknown RepID=UPI0003D5D387
Uncharacterized protein {ECO:0000313|EMBL:ETI66453.1}; TaxID=1131730 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus vireti LMG 21834.;"
thiol-disulfide oxidoreductase DCC
scnpilot_solids2_trim150_scaffold_340_curated_2
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

946..4653
DNA (3708bp) protein (1236aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA polymerase III subunit alpha n=1 Tax=Cytophaga aurantiaca RepID=UPI00037A9255
scnpilot_solids2_trim150_scaffold_340_curated_3
unknown

Not on your lists

comp(4783..5304)
DNA (522bp) protein (174aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_340_curated_4
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5544..9338
DNA (3795bp) protein (1265aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J1A8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAZ96057.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_340_curated_5
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

9452..11092
DNA (1641bp) protein (547aa)
NAD+ synthetase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWW6_SOLCM
NAD+ synthetase
Tax=BJP_IG2103_Bacteroidetes_37_22
scnpilot_solids2_trim150_scaffold_340_curated_6
RBG_19FT_COMBO_Bacteroidetes_42_10_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11104..12882)
DNA (1779bp) protein (593aa)
Putative uncharacterized protein id=4706659 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Tax=RBG_19FT_COMBO_Bacteroidetes_42_10_curated
scnpilot_solids2_trim150_scaffold_340_curated_7
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13067..14098)
DNA (1032bp) protein (344aa)
holliday junction DNA helicase ruvb; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB id=4645993 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_solids2_trim150_scaffold_340_curated_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14119..15357)
DNA (1239bp) protein (413aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE6_NIAKG
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
scnpilot_solids2_trim150_scaffold_340_curated_9
Thermodesulfobacterium commune, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(15444..16469)
DNA (1026bp) protein (342aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
dehydrogenase n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B74A00
Dehydrogenase {ECO:0000313|EMBL:AIH04365.1}; TaxID=289377 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfobacterium commune DSM 2178.;"
scnpilot_solids2_trim150_scaffold_340_curated_10
unknown

Not on your lists

16712..18541
DNA (1830bp) protein (610aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_340_curated_11
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18559..19638)
DNA (1080bp) protein (360aa)
Permease YjgP/YjgQ family protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5P481_9PORP
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:CCZ10893.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
permease YjgP/YjgQ family protein
scnpilot_solids2_trim150_scaffold_340_curated_12
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19643..20773)
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
tRNA-guanine transglycosylase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J6Q9_9SPHI
scnpilot_solids2_trim150_scaffold_340_curated_13
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20825..21922
DNA (1098bp) protein (366aa)
Glycosyl transferase family 2 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XT84_PEDHD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU03645.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_340_curated_14
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21913..22521
DNA (609bp) protein (203aa)
RNA polymerase subunit sigma-24 n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A7017
Sigma-24 {ECO:0000313|EMBL:GAF02545.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
sigma-70 family RNA polymerase sigma factor
scnpilot_solids2_trim150_scaffold_340_curated_15
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22699..24768
DNA (2070bp) protein (690aa)
PAS sensor protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZR85_9EURY
PAS sensor protein {ECO:0000313|EMBL:ELY88995.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
PAS domain S-box
scnpilot_solids2_trim150_scaffold_340_curated_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24870..25580
DNA (711bp) protein (237aa)
Thioredoxin domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHR6_FLUTR
Thioredoxin domain-containing protein
Thioredoxin domain-containing protein {ECO:0000313|EMBL:AEA44844.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_340_curated_17
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25623..26672
DNA (1050bp) protein (350aa)
cellulase; K01179 endoglucanase [EC:3.2.1.4]
Cellulase {ECO:0000313|EMBL:AEE51518.1}; EC=3.2.1.4 {ECO:0000313|EMBL:AEE51518.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Cellulase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZU8_HALH1
scnpilot_solids2_trim150_scaffold_340_curated_18
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26959..28002
DNA (1044bp) protein (348aa)
ATP synthase f0 subcomplex a subunit; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RZW8_LEAB4
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_solids2_trim150_scaffold_340_curated_19
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

28037..28267
DNA (231bp) protein (77aa)
ATP synthase F0 subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:755 RepID=R5GKL6_9BACT
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_340_curated_20
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28364..28888
DNA (525bp) protein (175aa)
ATP synthase F0 subunit b; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036F36C6
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
scnpilot_solids2_trim150_scaffold_340_curated_21
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28897..29457
DNA (561bp) protein (187aa)
ATP synthase F1 subcomplex subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
ATP synthase subunit delta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP09_NIAKG
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
scnpilot_solids2_trim150_scaffold_340_curated_22
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29587..31116
DNA (1530bp) protein (510aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I id=1780035 bin=GWE2_Bacteroidetes_42_24 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
scnpilot_solids2_trim150_scaffold_340_curated_23
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31177..31674
DNA (498bp) protein (166aa)
Ferric uptake regulator, Fur family n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TVL7_MARTH
ferric uptake regulator, fur family; K03711 Fur family transcriptional regulator, ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ADR21130.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
scnpilot_solids2_trim150_scaffold_340_curated_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31666..32190)
DNA (525bp) protein (175aa)
methylated-DNA-[protein]-cysteine S-methyltransferase (EC:2.1.1.63); K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GQN1_9GAMM
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_solids2_trim150_scaffold_340_curated_25
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32194..32583)
DNA (390bp) protein (130aa)
Response regulator receiver protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L5Z9_HALH1
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEE53059.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_340_curated_26
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32841..35561
DNA (2721bp) protein (907aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase 1 n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BTA6_9FLAO
scnpilot_solids2_trim150_scaffold_340_curated_27
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

35616..36221
DNA (606bp) protein (202aa)
Transglutaminase n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6D3V7_BACAZ
Transglutaminase-like enzyme, predicted cysteine protease {ECO:0000313|EMBL:KEF39323.1}; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans MEV2011.;"
transglutaminase-like enzyme, predicted cysteine protease
scnpilot_solids2_trim150_scaffold_340_curated_28
unknown

Not on your lists

comp(36226..36615)
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_340_curated_29
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(36798..37043)
DNA (246bp) protein (82aa)
50S ribosomal protein L31 type B n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KWE1_HALH1
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_340_curated_30
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(37198..39741)
DNA (2544bp) protein (848aa)
Cellulosome anchoring protein cohesin region id=4339521 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
PKD domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Displaying items 1-30 of 38 in total

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