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scnpilot_solids2_trim150_scaffold_20_curated_125

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(140873..141232)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Capnocytophaga sp. oral taxon 863 str. F0517 RepID=U2C7Y8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 110.0
  • Bit_score: 59
  • Evalue 3.60e-06
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI63501.1}; TaxID=1227266 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 863 str. F0517.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.8
  • Coverage: 110.0
  • Bit_score: 59
  • Evalue 5.10e-06

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Taxonomy

Capnocytophaga sp. oral taxon 863 → Capnocytophaga → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 360
ATGGAAGATAAACTACAAAAAATATTAGACAAAGTAAAAGAGGAACGCATCTTAAAACGAGTAGGACAAAAAGAGATTGCAGCATTTATGGATATTGATGTCCGTACATATAACCAAATTGAAAACGGTAAATCAAACTTATCATTACAGCAACTGTTAAGCATTGCCGCATTTTTTAAAAGAGATATTAGCTATTTCATTTCATCAGACCAAAGTAATCATATTGAAAGTTCTCCTAACTCAGGTGTATTTTATGATACTAGTTCCCAAAATAATTATAGCAGCGAAGCAATTGCTGCCTACAAGTTGCTCGTAAAAAACCTACAAGAAGAAGTTAAACGGCTTAATTCGCAAGTTTAA
PROTEIN sequence
Length: 120
MEDKLQKILDKVKEERILKRVGQKEIAAFMDIDVRTYNQIENGKSNLSLQQLLSIAAFFKRDISYFISSDQSNHIESSPNSGVFYDTSSQNNYSSEAIAAYKLLVKNLQEEVKRLNSQV*