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scnpilot_solids2_trim150_scaffold_20_curated_142

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(159125..160216)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6R9_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 349.0
  • Bit_score: 442
  • Evalue 4.60e-121
Putative RND-type efflux pump membrane fusion protein {ECO:0000313|EMBL:GAO43835.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 362.0
  • Bit_score: 475
  • Evalue 6.90e-131
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 349.0
  • Bit_score: 442
  • Evalue 1.40e-121

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1092
ATGAAAATTAGAATATCAATTATTACGTGGATGCTATTAGCTTTTATGGCAGCGATAGAAAGTTGTAAGAGTAAACCGATGGAAGAAGATGCTACTGCATTTTCTATGAGTGATACCATGATGCGCAAGTGCGATTTTTACAAAGTAGGCTATGAAGATGTGAAGAACGAGGTGCGACTTTTTGGAAAAATTGAAGCCGATAATAACAAGACAGCTCAAGTGTTTTCAGCTGTTGATGGCTTGGTAACATCAATAAATATTGGGCTTGGAGATTATGTGAAAGAAGGTGAAGTATTAGCAACAATACAAAGTAGCGAGGTAGCGCGGTATGAACAAGAGCGTTTAGATGCAATAAATGAAGTAGCTATTGCCGAGAAAAATTTGCAAGTACAGAATGATTTATCAGCCGGAAAATTGAACTCCGAAAAAGATTTAAAAGTGGCGGAATCCGAGTTAGCAAAAGCTAAGGCAAACCTTGCACGCTTAAATGAAATTTACAAAATTTATCACTTCAAAAAAGGCTCTGTGTTTCCTGTAATAGCGCCAATTAGCGGCTTTATTACTACTAAGCAAATCAATATAAATGAACTGCTTCGGTTAAATGAAGAGAATCCTCTTTTTTCAATAGCCAATATAAGTGAAGTGTGGGCAGTTGCTTATGTGAACGAAAGCAATATTGCATACATAAAAGAAGGGTACGATGTAAATGTAAACACACTTGCTTTTCCTGATTCGCCATACAAAGGAAAGATTGAAAAAATTTACAACGTAATAGATGCGAATACGAAATCAATGAAATTTAGAGTGCGCATTCCTAACAGCGATTTTAAACTAAAACCAGATATGAATTGTACGGTTAGCGTAAACTATACTGAGAATAAAAATATGTTGGCAGTGCCTTCTGCTGCTGTAATTTTTGATAAGAGTAAGTATTGGGTGATGGTTTTTAAAGACCGAAATAACATAGAAACTCGACAAGTTGAAATATATCGCCAGTTAGGAAATACAAGCTATATCCTGAGCGGGCTTAGTGAAGGTGAAACCATAATTTCAAAAAATGGTTTGTTGGTTTATGATGCTATTAACGATTAA
PROTEIN sequence
Length: 364
MKIRISIITWMLLAFMAAIESCKSKPMEEDATAFSMSDTMMRKCDFYKVGYEDVKNEVRLFGKIEADNNKTAQVFSAVDGLVTSINIGLGDYVKEGEVLATIQSSEVARYEQERLDAINEVAIAEKNLQVQNDLSAGKLNSEKDLKVAESELAKAKANLARLNEIYKIYHFKKGSVFPVIAPISGFITTKQININELLRLNEENPLFSIANISEVWAVAYVNESNIAYIKEGYDVNVNTLAFPDSPYKGKIEKIYNVIDANTKSMKFRVRIPNSDFKLKPDMNCTVSVNYTENKNMLAVPSAAVIFDKSKYWVMVFKDRNNIETRQVEIYRQLGNTSYILSGLSEGETIISKNGLLVYDAIND*