ggKbase home page

scnpilot_solids2_trim150_scaffold_20_curated_145

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(162910..163581)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB25_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 225.0
  • Bit_score: 316
  • Evalue 3.10e-83
Transcriptional regulator {ECO:0000313|EMBL:KFD40030.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 226.0
  • Bit_score: 321
  • Evalue 7.80e-85
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 225.0
  • Bit_score: 316
  • Evalue 9.60e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Schleiferia thermophila → Schleiferia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 672
ATGAATGTTTTGATAATTGAAGATGATACAACGCTAAATCAAAATATTAGTGAAGCATTACAGGCAGAAGGTATAATTGTAACTTCAATTTACGATGGTTTGTTAGCCGAGCGAACACTCAAAAGAAACACATTCGATTGTGTGGTAATGGACATAAATTTGCCAGGGAAAAATGGATTTGATTTGTGTAGCGATTTCAGGCAATTCAATACAAACACGCCTGTGATAATGCTCACAGCTTTTGGTGAGTTAGATGATAAGATTCAAGGATTTAATTGCGGTGCAGATGATTATCTCACAAAACCGTTTTATATGCGAGAATTACTTCTTCGCATTCACTCGCTGGTGAAAAGAGCAAACACAAAAGATGTTCAGAATGCAATAATTACTGCCGATGATATTGTGATTGATACAAAAACAAAAAGTGTAACTCGACAAGGTGAAGCAATTACGCTCACACCAAGAGAATACCAAATTTTGCTGCGACTAATTGAGAATAAAGGTGAGCTGGTTTCTAAGAAAGAATTGATACAAGAAATTTGGGGAAACATTTTAGAAGCCAATACAAATACTATTGAAGTGTATATCAATTTTCTTCGCAATAAAATTGATAAACCTTTTAGAAAACAAAATATTAAAACAAAAGTAGGATATGGTTACTACTTTGAATAA
PROTEIN sequence
Length: 224
MNVLIIEDDTTLNQNISEALQAEGIIVTSIYDGLLAERTLKRNTFDCVVMDINLPGKNGFDLCSDFRQFNTNTPVIMLTAFGELDDKIQGFNCGADDYLTKPFYMRELLLRIHSLVKRANTKDVQNAIITADDIVIDTKTKSVTRQGEAITLTPREYQILLRLIENKGELVSKKELIQEIWGNILEANTNTIEVYINFLRNKIDKPFRKQNIKTKVGYGYYFE*