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scnpilot_solids2_trim150_scaffold_20_curated_148

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 165250..165927

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AK45_FLELS similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 225.0
  • Bit_score: 356
  • Evalue 2.10e-95
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:GAL83650.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 225.0
  • Bit_score: 373
  • Evalue 3.00e-100
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 225.0
  • Bit_score: 356
  • Evalue 6.50e-96

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 678
ATGAAAATTTTAGTTGTTGAAGACGAGAAAGAACTCATGCAAGCCATTTCAGCTTCGCTTGAAAAAGAACATTTTATTATTGAAACTGCCGGAGATTTTGCAACTGCCAGCGATAAGATTGCTATTTACGATTACGATTGCATTTTGCTTGATATAATGCTGCCCGGAGGTAGTGGGCTTCAACTTTTAGAGGAACTTAAAAAGCTTGGAAAGTCTGAAAACGTAATCATTATTTCTGCAAAAAATTCGCTTGATGATAAACTAAAAGGGTTAGAACTTGGTGCCGATGATTACCTTACTAAACCATTTCACATTGCAGAGCTGAATGCAAGAGTAAAAGCTGTTTTACGCAGAAAAGATTTGGGCGGAAAAACAACTATTGAGATTGCAAATGTTGCTTTAGATTTAAAGGAAAGACAACTCACCATTAACAAAGAAAACATTCCGTTAAACAGAAAAGAGTTTGATATTCTAAATTATTTTTTGCTGAATAAAAATCGTTTAGTAACAAAAACTGCTTTGGCAGAACACGTTTGGGGCGATAATATTGACCAAGCCGATAACTTTGATTTTATTTATTACCAAATAAAAAACCTGCGCAAAAAATTGCAAACAGCACAAGCCGATATTGAAATTGAGGCAGTTTATGGTTTTGGATATAAACTAATAGAGAAGTGA
PROTEIN sequence
Length: 226
MKILVVEDEKELMQAISASLEKEHFIIETAGDFATASDKIAIYDYDCILLDIMLPGGSGLQLLEELKKLGKSENVIIISAKNSLDDKLKGLELGADDYLTKPFHIAELNARVKAVLRRKDLGGKTTIEIANVALDLKERQLTINKENIPLNRKEFDILNYFLLNKNRLVTKTALAEHVWGDNIDQADNFDFIYYQIKNLRKKLQTAQADIEIEAVYGFGYKLIEK*