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scnpilot_solids2_trim150_scaffold_579_curated_19

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 23105..23827

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 218.0
  • Bit_score: 331
  • Evalue 1.80e-88
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 218.0
  • Bit_score: 331
  • Evalue 8.10e-88
tRNA pseudouridine synthase B n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUC9_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 218.0
  • Bit_score: 331
  • Evalue 5.80e-88

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 723
ATGCTACATCCTAACGGAAACGATAAAATTTCAGATGTTTCTTTATCCCCTTTAGAGGTTTGGGGCGAAGGCAGAGTTTTATTAATTGATAAACCACTCGACTGGACATCGTTTGATGTGGTCAGGAAGATACGCAATACCATAAAGATAAAAAAAGTAGGACATGCCGGTACGCTGGATCCATTGGCTACAGGGCTTTTGATCGTATGCACCGGAAAGTTTACCAAAAAGATCAATGAGTATATGGCGCAGGAAAAGGAATATACCGGCACGATTACTTTAGGCGCAGTTACGCCTACCTATGACCTTGAAAGTGAGCCTGAGAATTTAAAACCTTTAGATGGAATTACTGAAGAATTAATTCGTGAAACCACGAAACAATTCACCGGTGAAATTTTACAAACGCCACCCATTCATTCTGCCATAAAGCAAAAAGGGAAGCCCGTTTATCTTTTGGCGCGTAAAGGTGTTGATGTAACTCTTGAACCAAGAAAAATTACGATTAGTGAGTTTGAGATCACCAATATTGAAATGCCTGTGGTCTCTTTCAGGGTTGTTTGTACCACGGGAACGTATATACGCAGTTTGGCCAATGACTTTGGCGCTGTGCTTGGCTGTGGTGGCTACTTAAGCAAATTGCGCCGGACAAGGATAGGCAACTTTAAGGTAGAAGATGCCATGAACATGGAAGAATTTATAGCTTCGATTCCCGTTAAAAAATAA
PROTEIN sequence
Length: 241
MLHPNGNDKISDVSLSPLEVWGEGRVLLIDKPLDWTSFDVVRKIRNTIKIKKVGHAGTLDPLATGLLIVCTGKFTKKINEYMAQEKEYTGTITLGAVTPTYDLESEPENLKPLDGITEELIRETTKQFTGEILQTPPIHSAIKQKGKPVYLLARKGVDVTLEPRKITISEFEITNIEMPVVSFRVVCTTGTYIRSLANDFGAVLGCGGYLSKLRRTRIGNFKVEDAMNMEEFIASIPVKK*