ggKbase home page

scnpilot_solids2_trim150_scaffold_90_curated_11

Organism: solids_Chryseobacterium_1

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: comp(12433..12795)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVK0_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 119.0
  • Bit_score: 211
  • Evalue 4.40e-52
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 120.0
  • Bit_score: 215
  • Evalue 5.60e-53
Iojap family protein; K09710 ribosome-associated protein similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 119.0
  • Bit_score: 205
  • Evalue 1.30e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Epilithonimonas lactis → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 363
ATGAGTAAAAATACTGATAAACAGCAACTAATAGATAAAATCGTAGATGCAATACAGGATACCAAAGGTGAAGATATCATGATTTTTGACCTTACCGGAATTGAAAATTCTGTAGCCGAGACATTCATCATTTGTAGCGGAAATTCCAATACCCAAGTCTCTGCACTTGCAGGGAATATCGAGAAAAAAGTAAGAAACGAACTGCACGAAAGGCCTTGGCATGTAGAAGGCTCCGAAAATGCCCTTTGGGTATTGGTAGATTATGTCTCCGTAGTCGTTCATATATTCCAAAAAGAAGTTCGGGAGTATTACGAAATCGAAGAACTCTGGGGTGATGCCAAAATCACAAAAATCGAAGCTTAA
PROTEIN sequence
Length: 121
MSKNTDKQQLIDKIVDAIQDTKGEDIMIFDLTGIENSVAETFIICSGNSNTQVSALAGNIEKKVRNELHERPWHVEGSENALWVLVDYVSVVVHIFQKEVREYYEIEELWGDAKITKIEA*