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scnpilot_solids2_trim150_scaffold_90_curated

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_90_curated_1
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

635..2038
DNA (1404bp) protein (468aa)
membrane protein n=1 Tax=Riemerella columbina RepID=UPI0003767FCC
Spore maturation protein {ECO:0000313|EMBL:KEY18066.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_90_curated_2
unknown

Not on your lists

2127..2318
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_90_curated_3
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2425..3465
DNA (1041bp) protein (347aa)
Radical SAM domain protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X399_FLAB3
Radical SAM protein {ECO:0000313|EMBL:KFF14415.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
Radical SAM domain protein
scnpilot_solids2_trim150_scaffold_90_curated_4
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3516..5348
DNA (1833bp) protein (611aa)
xenobiotic-transporting ATPase (EC:3.6.3.44); K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LVE0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB60880.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
scnpilot_solids2_trim150_scaffold_90_curated_5
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5355..7493)
DNA (2139bp) protein (713aa)
Sodium/hydrogen exchanger n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X358_FLAB3
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ACU08871.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_90_curated_6
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7505..8074)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2SWU4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL70062.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_90_curated_7
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8149..8802)
DNA (654bp) protein (218aa)
phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X356_FLAB3
scnpilot_solids2_trim150_scaffold_90_curated_8
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8805..9677)
DNA (873bp) protein (291aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
Phosphatidate cytidylyltransferase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CKD1_9FLAO
scnpilot_solids2_trim150_scaffold_90_curated_9
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9702..10250)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVK2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:BAP29308.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_90_curated_10
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10399..12414)
DNA (2016bp) protein (672aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
cell division protein ftsH (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1N0I5_9FLAO
scnpilot_solids2_trim150_scaffold_90_curated_11
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12433..12795)
DNA (363bp) protein (121aa)
Ribosomal silencing factor RsfS n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVK0_9FLAO
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
Iojap family protein; K09710 ribosome-associated protein
scnpilot_solids2_trim150_scaffold_90_curated_12
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12872..13573
DNA (702bp) protein (234aa)
biotin/lipoate A/B protein ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin/lipoate A/B protein ligase n=2 Tax=Riemerella anatipestifer RepID=F0TMX1_RIEAR
Uncharacterized protein {ECO:0000313|EMBL:KIA90025.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
scnpilot_solids2_trim150_scaffold_90_curated_13
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13567..14661)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1LT38_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB58141.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_90_curated_14
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14681..15814)
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVJ7_9FLAO
Queuine/archaeosine tRNA-ribosyltransferase
scnpilot_solids2_trim150_scaffold_90_curated_15
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15820..16191)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVJ6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK37771.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_90_curated_16
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16195..16911)
DNA (717bp) protein (239aa)
Dolichol-phosphate mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
Glycosyltransferase, group 2 family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVJ5_9FLAO
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:KFF74159.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
scnpilot_solids2_trim150_scaffold_90_curated_17
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16976..17662
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JZH5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF14047.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_90_curated_18
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17608..18414
DNA (807bp) protein (269aa)
uroporphyrinogen-III synthase; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
Uroporphyrinogen-III synthase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVJ2_9FLAO
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KFE98611.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
scnpilot_solids2_trim150_scaffold_90_curated_19
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18498..20543
DNA (2046bp) protein (682aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EFK37766.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFK37766.1};; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
peptidase, family S9 (EC:3.4.21.83); K01354 oligopeptidase B [EC:3.4.21.83]
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVJ1_9FLAO
scnpilot_solids2_trim150_scaffold_90_curated_20
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20540..20908
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X343_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA90018.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_90_curated_21
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21022..22566
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
two-component regulatory system, sensor kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVI8_9FLAO
scnpilot_solids2_trim150_scaffold_90_curated_22
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22598..23284
DNA (687bp) protein (229aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CKE0_9FLAO
Transcriptional regulator {ECO:0000313|EMBL:KFE98606.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
two-component system, transcriptional regulatory protein
scnpilot_solids2_trim150_scaffold_90_curated_23
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23360..24019
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FMV1_9FLAO
Hypothetical lipoprotein {ECO:0000313|EMBL:ABQ04371.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_90_curated_24
unknown

Not on your lists

24041..24412
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_90_curated_25
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24505..25785
DNA (1281bp) protein (427aa)
Probable Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZJ0_FLAB3
TonB-dependent receptor {ECO:0000313|EMBL:KIA89258.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Co/Zn/Cd efflux system membrane fusion protein
scnpilot_solids2_trim150_scaffold_90_curated_26
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25819..27165
DNA (1347bp) protein (449aa)
Probable Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZJ0_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:GAE63709.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
Co/Zn/Cd efflux system membrane fusion protein
scnpilot_solids2_trim150_scaffold_90_curated_27
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27259..27666)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6S9Z0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU23067.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_90_curated_28
unknown

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comp(27653..28039)
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_90_curated_29
unknown

Not on your lists

comp(28138..28791)
DNA (654bp) protein (218aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_90_curated_30
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28975..29346
DNA (372bp) protein (124aa)
Putative transcriptional regulator n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CBM2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF02278.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
Helix-turn-helix type 3
Displaying items 1-30 of 125 in total

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