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scnpilot_solids2_trim150_scaffold_90_curated_47

Organism: solids_Chryseobacterium_1

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: 44820..46568

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 611.0
  • Bit_score: 841
  • Evalue 1.00e-240
Transcription termination factor Rho n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVL3_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 607.0
  • Bit_score: 827
  • Evalue 6.20e-237
transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 588.0
  • Bit_score: 763
  • Evalue 5.90e-218

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Taxonomy

Chryseobacterium sp. StRB126 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1749
ATGTTCAACTTAGAAACGCTAAGGTCTAAATCCATTTCAGAACTGACCAAAATTACCAAAGATTTGGGCGTGAAAGTAACCAAAAACAGCGATCCTGACACCATCATTTTCGCTATTCTTGATTTTCAGGCTTCCAATACCAAAATAGCTAAAGAATATTACCTCGCTTCCGAGAATCCTGCAAAGGAAGAAGAAACACAAAAAGCACCGGAGCAAGTGAAAAAAACAGCTCCCAGAAAGCGAAGTACACCAAAACCCAAACCCGAGGAAGTAAAACCCAAACCAGAAACTGCCGAAGAAAAATCAGAAGTCACGGATATACTTACCATTCCGGCTCCAGCTGCGGTACAGGTACAGCCAACTGAGCAAACTCCAGCGCCCACTTCTGATAAAAAGAAAAGACAAAGGGTAGACAACAAAATCGAACCTGAAAAATCGCAACCCGCTGAAAAACCAGCTCCCGCATCTTCCGAAAAAACGGAAACTCCTCCAGCGCCACAGCCTAAACCACAGCATCCAAATCAGGCCAACAACGGTGCGAAACAGCATCATCCTCAACATCAGCATAAAAATCCCAATCAACAAAAAAATACAGAACCGCAGCAGGAATCTGAATCTAAAAAGGAATTTAATTTCGACGGCCTTGTTATCATCGAAGGGGTTCTCGAAATTTTGCCAGACAATTACGGATTTCTCCGTTCCTCGGATTTCTCCTATATCTCTTCCCCCGATGATGTTTACGTATCTACCTCTCAAATCCGGAATTTCGGCCTGAAAACAGGAGATACTGTAAAAGGAATTGTAAGGTTGCCAAAAGAAGGAGAGAAATATTTTTCGCTTCAGAAACCATTGGAAGTAAATGGAAGAGATCTGGCTTTCATCAAGGATCGTGTTGCTTTTGAATATTTAACACCACTTTTTCCAGAAGAGAAATTCAATCTTGCCGGAAAAGAGTCTACGATATCCACCCGCGTGGTCGATTTATTTTCACCTATCGGAAAAGGACAGCGCGCCATGATTGTTGCGCAACCCAAAACCGGTAAAACCATGTTGTTGAAAGACATTGCCAATGCTATTGCAGCTAATCATCCCGAAGCTTATATGATGGTTCTTCTGATCGATGAACGTCCGGAAGAAGTTACTGACATGGAAAGGAGCGTGAATGCAGAAGTAATAGCTTCTACATTCGATGAAGCTGCAGATAAACACGTGAAAGTAGCGAATCTGGTTCTTGCAAAAGCACAGAGAATGGTAGAATGCGGACACGATGTTGTGATTCTGCTGGATTCTATTACCCGATTGGCAAGAGCTTATAATACCGTAACGCCTGCTTCCGGGAAAGTTCTTTCCGGTGGTGTGGATGCCAATGCGCTTCACCGTCCGAAAAGATTTTTTGGAGCTGCAAGAAATATTGAAGGCGGCGGATCTTTAACCATTATCGCCACTGCTCTTATTGACACAGGTTCTAAAATGGACGAAGTGATTTTTGAAGAATTTAAAGGAACCGGGAATATGGAACTGCAGCTCGACCGGAAAATTGCGAATAAAAGAGTATATCCGGCCATTGATTTGGTGTCCTCCAGTACACGACGGGATGACTTGCTTCTTGATGAAAACACCCAACAAAAAATGTGGATTTTCAGAAAGTATCTTTCTGATATGAATCCTTTGGAAGCGATGGAATTTGTTCAGAAAAATATAAAAGGAACATTGAACAACGAGGAGTTCTTGATGTCGATGAACCGTTAA
PROTEIN sequence
Length: 583
MFNLETLRSKSISELTKITKDLGVKVTKNSDPDTIIFAILDFQASNTKIAKEYYLASENPAKEEETQKAPEQVKKTAPRKRSTPKPKPEEVKPKPETAEEKSEVTDILTIPAPAAVQVQPTEQTPAPTSDKKKRQRVDNKIEPEKSQPAEKPAPASSEKTETPPAPQPKPQHPNQANNGAKQHHPQHQHKNPNQQKNTEPQQESESKKEFNFDGLVIIEGVLEILPDNYGFLRSSDFSYISSPDDVYVSTSQIRNFGLKTGDTVKGIVRLPKEGEKYFSLQKPLEVNGRDLAFIKDRVAFEYLTPLFPEEKFNLAGKESTISTRVVDLFSPIGKGQRAMIVAQPKTGKTMLLKDIANAIAANHPEAYMMVLLIDERPEEVTDMERSVNAEVIASTFDEAADKHVKVANLVLAKAQRMVECGHDVVILLDSITRLARAYNTVTPASGKVLSGGVDANALHRPKRFFGAARNIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKIANKRVYPAIDLVSSSTRRDDLLLDENTQQKMWIFRKYLSDMNPLEAMEFVQKNIKGTLNNEEFLMSMNR*