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scnpilot_solids2_trim150_scaffold_60_curated_30

Organism: solids_Chryseobacterium_1

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: 31764..32315

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN98_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 183.0
  • Bit_score: 311
  • Evalue 6.20e-82
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL75129.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 183.0
  • Bit_score: 311
  • Evalue 8.70e-82
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 183.0
  • Bit_score: 299
  • Evalue 1.00e-78

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Taxonomy

Chryseobacterium sp. CF314 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGAAGATAACCGACGCTGAAATTATTGCAATGATGCAGGAAGAACGAAGTCAGGAAAAAGGGCTTCGGGTTTTGATGGATACCTACCAAAGCAGATTGTACTGGCATATCAGAAGAATGATTGTGGATCACGATTTGGCTCAGGATGTTTTACAGGATACCTTCATCAAAGTATACCAGAATTTTCATCAATTTAAGCAGGAAAGTAAACTCTATACCTGGCTTTATCGGATTGCTACCAATGAAGCATTGCAACAGCTCAATAAGCTCAAGAGAATGAACAGAACGGATGAAGATCCTGAATATCACCTCGTTAACATGGTGGCGGATAACATTTCCGCAGAAGCCGACGAAATTCAAGTGCTGCTACAAAAGGCGATACAAACACTGCCTGAAAAGCAGAAACTGGTTTTTATGATGAGGTATTATGACGATTTGCCTTACGAGGAAATTTCAAATATTGTGGACATGTCAGTAGGGACTTTGAAAACCAACTATCATTACGCAAAACAAAAAATAGAAACCTACATAAAAGAAAATTACCAAGAATAA
PROTEIN sequence
Length: 184
MKITDAEIIAMMQEERSQEKGLRVLMDTYQSRLYWHIRRMIVDHDLAQDVLQDTFIKVYQNFHQFKQESKLYTWLYRIATNEALQQLNKLKRMNRTDEDPEYHLVNMVADNISAEADEIQVLLQKAIQTLPEKQKLVFMMRYYDDLPYEEISNIVDMSVGTLKTNYHYAKQKIETYIKENYQE*