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scnpilot_solids2_trim150_scaffold_60_curated

Search features with annotation key words

Displaying items 1-30 of 216 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_60_curated_1
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

39..587
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Myroides injenensis RepID=UPI00028819A4
Uncharacterized protein {ECO:0000313|EMBL:AJH16032.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
scnpilot_solids2_trim150_scaffold_60_curated_2
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

584..1486
DNA (903bp) protein (301aa)
integrase catalytic subunit n=1 Tax=Myroides injenensis RepID=UPI0002890798
Uncharacterized protein {ECO:0000313|EMBL:KJJ38432.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
integrase catalytic subunit
scnpilot_solids2_trim150_scaffold_60_curated_3
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1912..2655)
DNA (744bp) protein (248aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CNB0_9FLAO
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KFE99403.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
scnpilot_solids2_trim150_scaffold_60_curated_4
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2664..3614)
DNA (951bp) protein (317aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA84277.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
scnpilot_solids2_trim150_scaffold_60_curated_5
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3625..4296)
DNA (672bp) protein (224aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
tetrapyrrole methylase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Chryseobacterium sp. CF314 RepID=J2TAK8_9FLAO
scnpilot_solids2_trim150_scaffold_60_curated_6
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4296..5753)
DNA (1458bp) protein (486aa)
UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
UDP-N-acetylmuramate-alanine ligase n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1MEY7_9FLAO
UDP-N-acetylmuramate--alanine ligase {ECO:0000313|EMBL:KIA90145.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
scnpilot_solids2_trim150_scaffold_60_curated_7
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5704..6618)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUR9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KEY18039.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_60_curated_8
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6678..7271
DNA (594bp) protein (198aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21]
Thymidine kinase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K4P0_9FLAO
scnpilot_solids2_trim150_scaffold_60_curated_9
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7268..9715
DNA (2448bp) protein (816aa)
bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase (EC:6.3.2.10); K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUR7_9FLAO
Alanine racemase {ECO:0000313|EMBL:KIA90142.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
scnpilot_solids2_trim150_scaffold_60_curated_10
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9712..11856
DNA (2145bp) protein (715aa)
Putative patatin-like phospholipase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3J5_FLAB3
Patatin {ECO:0000313|EMBL:KEY18036.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
patatin-like phospholipase; K07001 NTE family protein
scnpilot_solids2_trim150_scaffold_60_curated_11
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11860..12273
DNA (414bp) protein (138aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Endoribonuclease YbeY n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3J6_FLAB3
metal-dependent hydrolase
scnpilot_solids2_trim150_scaffold_60_curated_12
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12312..14174
DNA (1863bp) protein (621aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CNP0_9FLAO
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
glucose inhibited division protein a
scnpilot_solids2_trim150_scaffold_60_curated_13
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14214..15032
DNA (819bp) protein (273aa)
Methyltransferase domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUR3_9FLAO
Methyltransferase type 11 {ECO:0000313|EMBL:KFC24221.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SAM-dependent methyltransferase
scnpilot_solids2_trim150_scaffold_60_curated_14
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15016..15105)
DNA (90bp) protein (30aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3J9_FLAB3
scnpilot_solids2_trim150_scaffold_60_curated_15
unknown

Not on your lists

comp(15144..16334)
DNA (1191bp) protein (397aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_60_curated_16
unknown

Not on your lists

16683..16853
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_60_curated_17
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16953..17381
DNA (429bp) protein (143aa)
rpiB; protein RpiB; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
RpiB/LacA/LacB family sugar-phosphate isomerase n=2 Tax=Bergeyella zoohelcum RepID=K1M0B3_9FLAO
RpiB/LacA/LacB family sugar-phosphate isomerase {ECO:0000313|EMBL:EKB60921.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
scnpilot_solids2_trim150_scaffold_60_curated_18
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17401..19554
DNA (2154bp) protein (718aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
Ribonuclease R n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K4N2_9FLAO
rnase r
scnpilot_solids2_trim150_scaffold_60_curated_19
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19555..20082
DNA (528bp) protein (176aa)
Chaperone protein DnaJ {ECO:0000313|EMBL:GAF04598.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
scnpilot_solids2_trim150_scaffold_60_curated_20
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20093..20782
DNA (690bp) protein (230aa)
Translocator protein, LysE family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUQ5_9FLAO
Lysine transporter LysE {ECO:0000313|EMBL:KIC61812.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_60_curated_21
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20779..21708
DNA (930bp) protein (310aa)
hypothetical protein; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
Putative MccF-like protein (Microcin C7 resistance) n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KQ06_9FLAO
Peptidase U61 {ECO:0000313|EMBL:KFC23680.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
scnpilot_solids2_trim150_scaffold_60_curated_22
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21708..22079
DNA (372bp) protein (124aa)
UPF0102 protein PMI13_00614 n=1 Tax=Chryseobacterium sp. CF314 RepID=J2TAJ7_9FLAO
UPF0102 protein RM51_15650 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein; K07460 putative endonuclease
scnpilot_solids2_trim150_scaffold_60_curated_23
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


22139..22807
DNA (669bp) protein (223aa)
glycoprotease family exported protein; K14742 hypothetical protease [EC:3.4.-.-]
Universal bacterial protein YeaZ n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUQ0_9FLAO
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EFK37475.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
scnpilot_solids2_trim150_scaffold_60_curated_24
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23395..25530
DNA (2136bp) protein (712aa)
Ferrichrome iron receptor n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X537_FLAB3
Ferrichrome iron receptor {ECO:0000313|EMBL:ACU07525.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
ferrichrome iron receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids2_trim150_scaffold_60_curated_25
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25584..26792
DNA (1209bp) protein (403aa)
PepSY-associated TM helix domain protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X538_FLAB3
PepSY-associated TM helix domain protein
PepSY-associated TM helix domain protein {ECO:0000313|EMBL:ACU07526.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_60_curated_26
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27220..29730)
DNA (2511bp) protein (837aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CNA0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL75134.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_60_curated_27
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29819..30382)
DNA (564bp) protein (188aa)
Maf-like protein maf n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUP8_9FLAO
Maf-like protein IX38_01825 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
Nucleotide-binding protein implicated in inhibition of septum formation
scnpilot_solids2_trim150_scaffold_60_curated_28
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30409..30927)
DNA (519bp) protein (173aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:EFK37472.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFK37472.1};; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUP7_9FLAO
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, yrbi family
scnpilot_solids2_trim150_scaffold_60_curated_29
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30917..31666)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUP6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK37471.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_60_curated_30
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31764..32315
DNA (552bp) protein (184aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN98_9FLAO
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL75129.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Displaying items 1-30 of 216 in total

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