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scnpilot_solids2_trim150_scaffold_407_curated_5

Organism: solids_Chryseobacterium_1

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: comp(3187..3486)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Empedobacter brevis RepID=UPI00035F5A63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 195
  • Evalue 2.70e-47
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK34684.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 92.0
  • Bit_score: 159
  • Evalue 3.00e-36
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 93.0
  • Bit_score: 153
  • Evalue 4.80e-35

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Taxonomy

Chryseobacterium gleum → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCATTTGGAAAACACATAAAAAGACTAAGAGAAAGTAAAGGATTGTTCCTACGGGAAGTTGGGGCTGCATTGGAACTGGATAGTGCTTTTATCAGTAAAGTCGAAAATGAAGAAAGACCATTGCCAAGAAAACACATCGAAAAGCTTGCAGAATTTTTGAATACCCCAATTGATGAGCTATTGGTTTTATGGTTTTCAGATAAAATAAAGGGACTTATTGACGATAAAGAAATAGGAAAGCAGGCTTTAAAAATTGTTTTAAAAGAATTAAATGCAATCAAGAATAATGCAGATTAG
PROTEIN sequence
Length: 100
MAFGKHIKRLRESKGLFLREVGAALELDSAFISKVENEERPLPRKHIEKLAEFLNTPIDELLVLWFSDKIKGLIDDKEIGKQALKIVLKELNAIKNNAD*