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scnpilot_solids2_trim150_scaffold_407_curated

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_407_curated_1
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..95)
DNA (93bp) protein (31aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037272CD
Uncharacterized protein {ECO:0000313|EMBL:KFF76109.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein; K06915
scnpilot_solids2_trim150_scaffold_407_curated_2
unknown

Not on your lists

comp(168..1109)
DNA (942bp) protein (314aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_407_curated_3
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1096..1923)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SEB0_PEDSD
hypothetical protein; K06915
Uncharacterized protein {ECO:0000313|EMBL:ADY54032.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_407_curated_4
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1926..3131)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000362D278
Uncharacterized protein {ECO:0000313|EMBL:KFF76110.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_5
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3187..3486)
DNA (300bp) protein (100aa)
XRE family transcriptional regulator n=1 Tax=Empedobacter brevis RepID=UPI00035F5A63
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK34684.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
helix-turn-helix domain-containing protein
scnpilot_solids2_trim150_scaffold_407_curated_6
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3691..3996
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F0S619_PEDSD
hypothetical protein
Conjugative transposon protein TraE {ECO:0000313|EMBL:EFK56940.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
scnpilot_solids2_trim150_scaffold_407_curated_7
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4008..4259
DNA (252bp) protein (84aa)
conjugate transposon protein n=1 Tax=Empedobacter brevis RepID=UPI00037A1855
Conjugal transfer protein TraF {ECO:0000313|EMBL:AIM37848.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_8
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4337..6841
DNA (2505bp) protein (835aa)
conjugate transposon protein n=1 Tax=Empedobacter brevis RepID=UPI00035E0248
Conjugal transfer protein TraG {ECO:0000313|EMBL:AIM37847.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
type IV secretory pathway VirB4 components-like protein
scnpilot_solids2_trim150_scaffold_407_curated_9
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6868..7500
DNA (633bp) protein (211aa)
conjugate transposon protein n=1 Tax=Empedobacter brevis RepID=UPI000377A44C
Uncharacterized protein {ECO:0000313|EMBL:KFF20046.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_10
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7503..8498
DNA (996bp) protein (332aa)
Conjugative transposon TraJ protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2Y1_9FLAO
Conjugal transfer protein {ECO:0000313|EMBL:AIM37845.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
conjugative transposon TraJ protein
scnpilot_solids2_trim150_scaffold_407_curated_11
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8520..9143
DNA (624bp) protein (208aa)
Conjugative transposon TraK protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT34_9SPHI
Conjugal transfer protein {ECO:0000313|EMBL:KFF20048.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_12
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9156..9584
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000375583D
Uncharacterized protein {ECO:0000313|EMBL:AIM37843.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_13
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9625..9891
DNA (267bp) protein (89aa)
nitrogen regulatory IIA protein n=1 Tax=Empedobacter brevis RepID=UPI0003672B20
Nitrogen regulatory IIA protein {ECO:0000313|EMBL:AIM37842.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_14
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9878..11212
DNA (1335bp) protein (445aa)
conjugal transfer protein TraM n=1 Tax=Empedobacter brevis RepID=UPI000364C509
Conjugal transfer protein TraM {ECO:0000313|EMBL:AIM37841.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
conjugative transposon TraM protein
scnpilot_solids2_trim150_scaffold_407_curated_15
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11237..12130
DNA (894bp) protein (298aa)
conjugate transposon protein n=1 Tax=Empedobacter brevis RepID=UPI00036F8AF9
Conjugal transfer protein TrbN {ECO:0000313|EMBL:KFF20052.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
conjugate transposon protein TraN
scnpilot_solids2_trim150_scaffold_407_curated_16
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12152..12712
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G255_9SPHI
Conjugal transfer protein TraO {ECO:0000313|EMBL:KFF20053.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
conjugative transposon protein trao
scnpilot_solids2_trim150_scaffold_407_curated_17
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12724..13173
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0P8_9FLAO
Conjugal transfer protein TraQ {ECO:0000313|EMBL:KFF20054.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_18
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13285..13566
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000363CBB0
Molybdenum ABC transporter permease {ECO:0000313|EMBL:AIM37837.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_19
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13629..14429
DNA (801bp) protein (267aa)
TIGR02391 family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRZ9_9SPHI
TIGR02391 family protein {ECO:0000313|EMBL:EEI94364.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_20
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14583..14894
DNA (312bp) protein (104aa)
DNA-binding protein n=1 Tax=Empedobacter brevis RepID=UPI00035CAAB3
DNA-binding protein {ECO:0000313|EMBL:AIM37836.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_21
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14875..15174
DNA (300bp) protein (100aa)
DNA-binding protein n=1 Tax=Empedobacter brevis RepID=UPI0003649E22
DNA-binding protein {ECO:0000313|EMBL:KGO11302.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_22
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15449..15898
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000376CB3A
Histidine kinase {ECO:0000313|EMBL:AIM37833.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
response regulator receiver protein
scnpilot_solids2_trim150_scaffold_407_curated_23
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16177..16983)
DNA (807bp) protein (269aa)
thiazole biosynthesis adenylyltransferase ThiF n=1 Tax=Empedobacter brevis RepID=UPI00035C8E38
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:KGO11300.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
uba/thif-type nad/fad binding protein
scnpilot_solids2_trim150_scaffold_407_curated_24
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16983..17705)
DNA (723bp) protein (241aa)
PRTRC system protein B n=1 Tax=Empedobacter brevis RepID=UPI00036876CC
PRTRC system protein B {ECO:0000313|EMBL:KGO11299.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_25
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17702..18868)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037ADFFE
Uncharacterized protein {ECO:0000313|EMBL:KGO11298.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_26
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18886..19104)
DNA (219bp) protein (73aa)
PRTRC system protein C n=2 Tax=Bacteroidetes RepID=C2G274_9SPHI
PRTRC system protein C {ECO:0000313|EMBL:KFF20071.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_27
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19132..19734)
DNA (603bp) protein (201aa)
PRTRC system protein E n=1 Tax=Empedobacter brevis RepID=UPI00037B6F48
Prtrc system protein e {ECO:0000313|EMBL:KGO11296.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
prtrc system protein e
scnpilot_solids2_trim150_scaffold_407_curated_28
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19747..19941)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003794681
Uncharacterized protein {ECO:0000313|EMBL:AIM37817.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_29
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19956..20294)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0F8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE65901.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_407_curated_30
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20312..20689)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000381E5FC
DNA-binding protein {ECO:0000313|EMBL:KGO11294.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
Displaying items 1-30 of 69 in total

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