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scnpilot_solids2_trim150_scaffold_57_curated_16

Organism: solids_Chryseobacterium_1

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: comp(16044..16673)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Crp/Fnr family n=4 Tax=Riemerella anatipestifer RepID=E4TDJ2_RIEAD similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 209.0
  • Bit_score: 309
  • Evalue 2.10e-81
cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 209.0
  • Bit_score: 309
  • Evalue 6.50e-82
Transcriptional regulator, crp/fnr family {ECO:0000313|EMBL:AFD56863.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 209.0
  • Bit_score: 309
  • Evalue 2.90e-81

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Taxonomy

Riemerella anatipestifer → Riemerella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 630
ATGGAAATCACAGAATCGGTAAAAGAACTTTTTGAACCTGAATTACTGGCTGAAATTATGGCCGTTGGCAGAAGAAAAACAGCCAAAGAAGGTGAAGTAATCATTAGTATTGGGCAGCGTTTGCTTTTCATGCCGATTGTACTTCAGGGAACCTTAAAAGTATCCATGATGCAGCCGGACGGCCGCGAAATGCTGATGTATTACCTGAATGCAAATGAAGGCTGTGCCATGTCGTTTACCTGCTGCATGCAGGAAGCCAAAAGCGAAATAATGGCCATCGCCGAAGAAGACGTAGAAATGTGGATGATTCCGGTAGAGTACATGGACTCCTGGATGCATAAATATCCCAGCTGGAAAAGTTTCGTGATGCGCACCATGCAAAACCGCTTTTACGAGATGCTGAGAGCACTGGACATGGTGGTTTTCAACGGTCTTGATGTACGACTCGCCAATTATCTCAGAGAAAAATCAAAGATCACCGGAAAAACTGTACTGAATGTTTCTCATGAGGAGATTGCCAACGATTTGGCCAGCTCACGCGTCGTGATCAGTCGCCTTCTTAAAAAACTGGAGAATGACGGTAAAGTGCTGCTGTACCGTAACCAGATCAAGCTGCTGAAGGATTTTTAA
PROTEIN sequence
Length: 210
MEITESVKELFEPELLAEIMAVGRRKTAKEGEVIISIGQRLLFMPIVLQGTLKVSMMQPDGREMLMYYLNANEGCAMSFTCCMQEAKSEIMAIAEEDVEMWMIPVEYMDSWMHKYPSWKSFVMRTMQNRFYEMLRALDMVVFNGLDVRLANYLREKSKITGKTVLNVSHEEIANDLASSRVVISRLLKKLENDGKVLLYRNQIKLLKDF*