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scnpilot_solids2_trim150_scaffold_57_curated

Search features with annotation key words

Displaying items 1-30 of 193 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_57_curated_1
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..147
DNA (147bp) protein (49aa)
Putative ABC transporter n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X285_FLAB3
ABC transporter {ECO:0000313|EMBL:KEY18548.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
ABC transporter
scnpilot_solids2_trim150_scaffold_57_curated_2
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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144..911
DNA (768bp) protein (256aa)
Nitrous oxide reductase maturation transmembrane protein NosY n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X286_FLAB3
Nitrous oxide reductase {ECO:0000313|EMBL:KEY18547.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Nitrous oxide reductase maturation transmembrane protein NosY; K01992 ABC-2 type transport system permease protein
scnpilot_solids2_trim150_scaffold_57_curated_3
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1069..1623
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X287_FLAB3
Fasciclin {ECO:0000313|EMBL:KIA84186.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_57_curated_4
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1793..3013)
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X288_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KEY18545.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_57_curated_5
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3051..3656)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI00035E4C5D
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACU08552.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_57_curated_6
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3774..5840
DNA (2067bp) protein (689aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
Polyphosphate kinase n=3 Tax=Riemerella anatipestifer RepID=F0TK67_RIEAR
Polyphosphate kinase
scnpilot_solids2_trim150_scaffold_57_curated_7
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5933..6823
DNA (891bp) protein (297aa)
exopolyphosphatase (EC:3.6.1.11); K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Ppx/GppA phosphatase n=3 Tax=Elizabethkingia RepID=H0KSQ0_9FLAO
Exopolyphosphatase {ECO:0000313|EMBL:AKH93361.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
scnpilot_solids2_trim150_scaffold_57_curated_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6820..7230
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7L667_BACOV
Putative membrane protease subunit {ECO:0000313|EMBL:KDS63597.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_57_curated_9
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7406..8632
DNA (1227bp) protein (409aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0T1_FLAB3
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:KIA83363.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
scnpilot_solids2_trim150_scaffold_57_curated_10
unknown

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comp(8760..8948)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_57_curated_11
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9492..9701)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PI55_MURRD
Sulfurtransferase {ECO:0000313|EMBL:KEY20100.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_57_curated_12
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9720..10025)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY20099.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Putative uncharacterized protein id=4401399 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
hypothetical protein
scnpilot_solids2_trim150_scaffold_57_curated_13
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10101..13358)
DNA (3258bp) protein (1086aa)
Cation/multidrug efflux pump n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CIL3_9FLAO
Multidrug transporter AcrB {ECO:0000313|EMBL:KIA88881.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
multidrug resistance protein. AcrB/AcrD/AcrF family protein
scnpilot_solids2_trim150_scaffold_57_curated_14
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13451..14536)
DNA (1086bp) protein (362aa)
RND family efflux transporter, MFP subunit n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T2F6_9FLAO
RND transporter {ECO:0000313|EMBL:KEY20098.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
membrane fusion efflux lipoprotein precursor
scnpilot_solids2_trim150_scaffold_57_curated_15
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14625..15929)
DNA (1305bp) protein (435aa)
Outer membrane protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KGB7_9FLAO
Transporter {ECO:0000313|EMBL:KIA88883.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
outer membrane efflux protein precursor
scnpilot_solids2_trim150_scaffold_57_curated_16
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16044..16673)
DNA (630bp) protein (210aa)
Transcriptional regulator, Crp/Fnr family n=4 Tax=Riemerella anatipestifer RepID=E4TDJ2_RIEAD
cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Transcriptional regulator, crp/fnr family {ECO:0000313|EMBL:AFD56863.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
scnpilot_solids2_trim150_scaffold_57_curated_17
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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16798..17421
DNA (624bp) protein (208aa)
Methyltransferase type 11 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5W1_SPHS2
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADZ80126.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_57_curated_18
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17481..18872
DNA (1392bp) protein (464aa)
beta-lactamase; K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
Beta-lactamase n=1 Tax=Galbibacter marinus RepID=K2NZ72_9FLAO
Zn-dependent hydrolase {ECO:0000313|EMBL:KFC22406.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
scnpilot_solids2_trim150_scaffold_57_curated_19
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18882..19127
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXJ2_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KFC22403.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_57_curated_20
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19138..19434
DNA (297bp) protein (99aa)
Thioredoxin n=1 Tax=Galbibacter marinus RepID=K2PRG1_9FLAO
Thioredoxin {ECO:0000313|EMBL:KFC22402.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
thioredoxin; K03671 thioredoxin 1
scnpilot_solids2_trim150_scaffold_57_curated_21
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19438..20145
DNA (708bp) protein (236aa)
Thioredoxin domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHR6_FLUTR
Thioredoxin {ECO:0000313|EMBL:KFF27056.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
Thioredoxin domain-containing protein
scnpilot_solids2_trim150_scaffold_57_curated_22
unknown

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20183..20596
DNA (414bp) protein (138aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_57_curated_23
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20633..22672
DNA (2040bp) protein (680aa)
Dipeptidyl-peptidase III n=1 Tax=Myroides odoratimimus CCUG 12700 RepID=S3XMW5_9FLAO
Dihydrofolate reductase {ECO:0000313|EMBL:KEY19301.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Peptidase family M49
scnpilot_solids2_trim150_scaffold_57_curated_24
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22780..24873)
DNA (2094bp) protein (698aa)
Lead, cadmium, zinc and mercury transporting ATPase (EC:3.6.3.3); K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Lead, cadmium, zinc and mercury transporting ATPase {ECO:0000313|EMBL:ACU07581.1}; EC=3.6.3.3 {ECO:0000313|EMBL:ACU07581.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Lead, cadmium, zinc and mercury transporting ATPase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X593_FLAB3
scnpilot_solids2_trim150_scaffold_57_curated_25
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25180..26343)
DNA (1164bp) protein (388aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003821C7D
alanine racemase
scnpilot_solids2_trim150_scaffold_57_curated_26
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(26350..27492)
DNA (1143bp) protein (381aa)
Amidohydrolase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R5K0_OWEHD
amidohydrolase
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_solids2_trim150_scaffold_57_curated_27
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27816..28907
DNA (1092bp) protein (364aa)
Peptidase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5F6_FLAB3
peptidase
Peptidase {ECO:0000313|EMBL:ACU07644.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_57_curated_28
unknown

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28921..29034
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_57_curated_29
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29238..30632
DNA (1395bp) protein (465aa)
flavin-containing monooxygenase; K00485 dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.8]
Putative flavin-containing monooxygenase n=1 Tax=Bizionia argentinensis JUB59 RepID=G2ECW0_9FLAO
Potassium transporter {ECO:0000313|EMBL:KIA88100.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
scnpilot_solids2_trim150_scaffold_57_curated_30
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30764..36469)
DNA (5706bp) protein (1902aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CIP 101113 RepID=H1H6I7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHO12672.1}; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CIP 101113.;"
Protein of unknown function (DUF3320).
Displaying items 1-30 of 193 in total

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